Burkholderia sp. PAMC 28687: AX768_29425
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Entry
AX768_29425 CDS
T05699
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
bui
Burkholderia sp. PAMC 28687
Pathway
bui00260
Glycine, serine and threonine metabolism
bui01100
Metabolic pathways
Module
bui_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bui00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AX768_29425
Enzymes [BR:
bui01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
AX768_29425
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
AX768_29425
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
Pyr_redox_3
FAD_oxidored
NAD_binding_8
FAD_binding_2
DAO
Pyr_redox
HI0933_like
NAD_binding_7
FAD_binding_3
Thi4
GIDA
AdoHcyase_NAD
AlaDh_PNT_C
XdhC_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AMM18218
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All DBs
Position
3:1432485..1435487
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AA seq
1000 aa
AA seq
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MSQKDRLATGGRINRAISLTFTFNGKTYQGHQGDTLASALLANGVHFVARSWKYHRPRGI
VTADVAEPNAVVQLETGAYTVPNARATEIELYQGLVATSVNAKPSIENDRMAVNQKIARF
IPAGFYYKTFMWPRKFWPKYEEVIRDAAGLGKAPEQVDADRYDKCFAHCDVLVVGAGPSG
LAAAHAAALSGARVFLVDDQPELGGSLLSCRAEIDGAPGLKWAQKIEAELRKMPDVKILC
RSTAFGYQDHNLVTVTQRLTEHLPVSMRKGTRELMWKIRAKRVILATGAQERPIVFGNND
LPGVMLASAVSSYLHRFAVLPGRNAVVFTNNDSGYQCALDLKAAGAQVTVVDPRLADEKG
ALQAQAKRYGVKVLNGSVVTVAQGKLRVASVEINAYSNGTVGAKQADLPCDLLAMSGGWS
PILHLFAQSGGKAHWHDEKLCFVPGKAMQAESSVGGCAGEFTLARAIRFAVDAGVDAARA
VGLIVARPTPVQVAEISEAPLTPLWLVGGRELATRGPKQFIDYQNDVSAADIFLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAQALNKTIPETGTTTFRPNYTPVTFGTFAG
RELGEFLDPVRKTAVHEWHVENGAAFEDVGNWKRPWYYPRPGEDMHAAVARESLATRTSV
GILDASTLGKIDIQGPDAAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLA
DQHYMMTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVC
RDIDFANAAFPFMSFREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMAAGAE
FDITPYGTETMHVLRAEKGYIIVGQDTDGSMTPYDLGMGGLVAKSKDFLGKRSLTRSDTA
KAGRKQLVGLLAEDGSFVIPEGSQIVAGPFSGETAPMLGHVTSSYFSPILKRSIAMAVIK
GGLDKIGESVMIPLAGGKQMPAKITSSVFYDSEGARQHVE
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaccgactcgctacgggcgggcgcatcaatcgcgcgatctcgctcacg
ttcacgttcaacggcaagacgtatcagggccatcagggcgacacgctcgcgtccgcgctg
ctcgccaatggtgtgcactttgtcgcgcgtagctggaagtaccatcggccgcgcggcatt
gtgacagccgacgttgccgagccgaatgcggtcgtccagctcgagaccggcgcttatacc
gtgccgaatgcgcgtgcgacggaaatcgagttgtatcaagggctggtcgccacgagcgtg
aacgcgaagccgagcatcgaaaacgatcgcatggcggtgaaccagaagatcgcgcgtttc
attcccgccggtttctattacaagaccttcatgtggccgcgcaagttctggccgaagtac
gaagaagtgattcgcgacgccgccggtctcggcaaggcgccggaacaagtcgatgccgac
cgctacgacaagtgcttcgcgcattgcgacgtgctcgtggtcggcgcgggtccttcgggc
cttgctgcggcgcatgcggcggctttgtcgggcgcgcgtgtgtttctcgtcgatgaccag
ccggaactcggtggctcgctgctgtcgtgccgcgcggaaatcgatggtgcgcccgggctg
aaatgggcgcaaaagatcgaagccgaattgcgcaagatgcccgatgtaaagatcctgtgc
cgcagcacggcgtttgggtatcaggaccacaacctcgtcaccgtcacgcagcgtctgacc
gagcatctgccggtatcgatgagaaagggtacgcgcgaactgatgtggaaaattcgcgcc
aagcgcgtgattctcgcgaccggcgcgcaggaacgccccatcgtatttggcaacaacgac
cttccgggcgtgatgctggcgtcggccgtgtcttcgtatctgcatcgcttcgccgtgctg
ccgggacgtaacgccgtggtgttcacgaacaacgacagcggctaccaatgtgcactggat
ctgaaggctgcgggcgcgcaagtgaccgtcgtggaccctcgtctcgccgatgaaaaaggc
gcgctgcaggctcaggcaaaacgttatggtgtaaaggtgctgaacggatcggtcgtgacg
gttgcgcagggcaagctgcgggttgcatcggttgaaatcaacgcttattcgaatggcact
gttggcgcaaagcaagccgacctgccttgcgacctgctcgccatgtccgggggctggagc
ccgatcctgcacttgttcgcacagtccggcggcaaggcgcactggcatgacgaaaaactg
tgtttcgtccccggcaaggccatgcaagccgagagcagcgtgggcggttgcgcgggcgaa
ttcacgcttgcccgcgcgattcgttttgccgtcgatgcaggcgtggatgcagcgcgtgcg
gtcggcttgatcgtcgcacgcccgacgcccgtgcaagtcgccgagatcagcgaagcaccg
ttgacgccgctttggctcgtcggcggccgcgagcttgcgacgcggggtcccaagcagttc
atcgactatcaaaacgatgtatccgccgccgatattttccttgcggcgcgcgaaggtttc
gagtcggtcgagcacgtgaagcgctatacggcgatgggattcggcacggatcagggcaaa
ctcggcaacatcaacggcatggcgattctcgcgcaagccttgaacaagaccatccccgaa
acaggcacgacgaccttccgtccgaactacacgccggtgaccttcggcacgttcgccggc
cgcgagctgggcgagtttctcgatccggtccgcaagactgcggtgcacgagtggcacgtt
gaaaacggcgctgcgttcgaagatgtgggcaactggaaacggccttggtattacccgcgt
ccgggtgaagacatgcacgcagcggtcgcccgtgaatcgctcgccacgcgtacgagcgtc
ggcatcctcgatgcgtcgacccttggcaagatcgacattcaaggtcctgacgccgcgaag
ctgctcaactgggtctacacaaacccgtggagcaagctggaagtgggcaaatgccgatat
ggcctgatgctcgacgaaaacggcatgatcttcgacgacggcgtgaccgtacgtctcgcc
gaccagcactacatgatgacgaccaccaccggcggcgcggctcgcgtgctgacgtggctc
gaacgctggttgcagaccgagtggccggacatgcgcgtgcgcctggcatcggtgacggat
cactgggcgacctttgccgtggtcggaccgaacagccgcaaagtcctgcagaaggtctgt
cgcgatatcgacttcgcgaatgccgcgtttccgttcatgagctttcgagaagggactgtc
gcgggcgcggcatcacgtgtcatgcgcatcagcttttccggcgaactggcatacgaagtc
aacgtgcccgcgaacgtggggcgcgcggtgtgggaagcgttgatggcggccggcgccgag
tttgacatcacgccttatggcacggaaaccatgcacgtgttgcgtgcggagaagggttac
atcatcgtgggccaggataccgatggttccatgacgccgtacgaccttggcatgggcgga
ctcgttgcgaagtccaaggactttcttggcaagcgttcgctgacgcgttcggatacggcc
aaggcgggacgcaagcaactggtcggactgctcgccgaagacgggtcgttcgtgatcccg
gaaggctcgcaaatcgtcgcgggtccgttcagcggagagacagcaccgatgctcggccat
gtcacctccagctatttcagccccattttaaagcgctcgatcgcgatggccgtgatcaag
ggcggtctcgacaagatcggcgagtcagtgatgattccgcttgccggcggcaagcagatg
ccggcaaaaatcaccagctcggtgttctacgacagcgaaggagcacgtcaacatgtggaa
tga
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