Burkholderia sp. PAMC 28687: AX768_29515
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Entry
AX768_29515 CDS
T05699
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bui
Burkholderia sp. PAMC 28687
Pathway
bui00260
Glycine, serine and threonine metabolism
bui00460
Cyanoamino acid metabolism
bui00630
Glyoxylate and dicarboxylate metabolism
bui00670
One carbon pool by folate
bui00680
Methane metabolism
bui01100
Metabolic pathways
bui01110
Biosynthesis of secondary metabolites
bui01120
Microbial metabolism in diverse environments
bui01200
Carbon metabolism
bui01230
Biosynthesis of amino acids
bui01240
Biosynthesis of cofactors
bui04981
Folate transport and metabolism
Module
bui_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bui00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AX768_29515 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AX768_29515 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AX768_29515 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AX768_29515 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AX768_29515 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AX768_29515 (glyA)
Enzymes [BR:
bui01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AX768_29515 (glyA)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
ZapD
Motif
Other DBs
NCBI-ProteinID:
AMM18433
LinkDB
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Position
3:1455307..1456596
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AA seq
429 aa
AA seq
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MANSTTRPAAPFFDEPLATRDVSVRSAILKELERQQSQIELIASENIVSRAVLEAQGSVL
TNKYAEGYPGKRYYGGCEFVDEIETLAIDRVKRIFNAQFANVQPHSGAQANGAVMLALTK
PGDTVLGMSLDAGGHLTHGAKPAMSGKWFNAVQYGVNRETMLIDYEQIEELAMQHKPTLL
IAGFSAYPRELDFARLRAIADKAGSKLMVDMAHIAGVIAAGRHQNPVEHAHVVTSTTHKT
LRGPRGGFVLTNDEDIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALQPSFKTYIDNVL
ANARALGEVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGNQVEHALERAGITCNKNGIPFD
PEKPTVTSGVRLGTPAGTTRGFGVAEFRDIGRLIVEVFDALRDHPEGHAATEHRVRREIF
ALCERFPIY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattccacgacccgccccgccgcgcctttctttgacgaaccgcttgccactcgc
gatgtatccgtgcgcagcgcgatcctcaaggagctggagcgccagcaatcgcaaatcgaa
ttgatcgcgtcggaaaacatcgtgtcgcgtgcggtgctcgaggcgcagggttcggtgctg
acgaataaatacgcggaagggtacccgggcaagcgttattacggcggttgcgaattcgtc
gatgaaatcgaaacgcttgccattgatcgtgtgaagcgaatcttcaacgcgcagttcgcg
aacgtgcagccgcactcgggcgcacaggccaacggcgcggtgatgctggcgttgaccaag
cctggcgacacggtgctcggcatgtcgctcgatgcaggaggccacttgacgcatggcgcc
aagccagccatgtccggcaagtggttcaacgcggtgcagtacggcgtgaatcgcgagacc
atgttgatcgattacgagcaaatcgaagaacttgcgatgcagcacaagccgacgttgctg
atcgcgggtttctcggcctacccccgcgaacttgacttcgcgcgcttgcgtgccattgcc
gacaaggccggctcgaagctcatggtcgacatggcgcacatcgccggcgtgatcgcagcg
gggcgtcatcagaatccggtcgagcatgcgcacgtggtgacatctaccacgcacaagacc
ttgcgcggtccgcgtggcggctttgtgctgaccaatgacgaagacatcgccaagaagatc
aattccgcggttttccctggcctccagggcggcccgctcatgcacgtgatcgccggcaag
gccgttgccttcggcgaggcgctgcagccttcgttcaagacgtatatcgacaatgtgctg
gcgaatgccagggcgctgggcgaagtgctcaaggccggtggcgtggatctcgtcacgggc
ggcacggacaaccacttgctgctcgtcgacctgcgtccgaagggattgaagggcaatcag
gtcgagcatgcgttggaacgcgccggtatcacctgcaacaagaacggcatcccgttcgat
ccggaaaagcccacagtcacttcgggcgtgcgcctcggtacgccggccggcaccacgcgc
ggttttggcgtggccgaatttcgcgatattggccgcctgatcgtggaggtgttcgacgcg
ctgcgcgaccatccggaaggccatgccgccacagaacaccgcgtgcgccgcgagatcttc
gcgctgtgcgaacgcttccccatttattga
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