Stenotrophomonas maltophilia JV3: BurJV3_0065
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Entry
BurJV3_0065 CDS
T01596
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
buj
Stenotrophomonas maltophilia JV3
Brite
KEGG Orthology (KO) [BR:
buj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
buj03032
]
BurJV3_0065
03400 DNA repair and recombination proteins [BR:
buj03400
]
BurJV3_0065
Enzymes [BR:
buj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BurJV3_0065
DNA replication proteins [BR:
buj03032
]
Prokaryotic type
DNA Topoisomerases
BurJV3_0065
DNA repair and recombination proteins [BR:
buj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BurJV3_0065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
Motif
Other DBs
NCBI-ProteinID:
AEM49401
LinkDB
All DBs
Position
76179..77237
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AA seq
352 aa
AA seq
DB search
MPTPSTPERQAARAAGLRYVDDTQPGISRRRAGKGFSYRDADGHAVRDAATLQRIRALAI
PPAYTAVWICAHATGHLQATGRDARGRKQYRYHADWAAVRDAGKFDRVIAFGEALPALRR
RLSRDLKHSGFPREKVLAVVVALLADTLVRVGNESYAKENRSFGLTTLRNRHLDLLRGGR
VRMRFRGKSGQLHEVTVGDRRLGTLVRGVQQLPGQALFQYRDDDGAIQPVDSGAVNDYLR
EVMGEEFTAKDFRTWGGTLAAVQAFAATELPEPASQRALAKVQREVVCKVATQLGNTPAV
CRKAYIDPCVFAGWERGELAKLAGLRGPRQWEQATLRVLRRARRLSRSRQPQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccccctctacccccgaacgacaggccgcgcgcgctgcgggcctgcgctatgtc
gatgacacccagccgggcatcagccggcgccgtgccggcaagggcttcagctaccgcgat
gccgatggccacgcggtgcgcgatgccgccaccctgcagcggatccgcgcgctggcgatc
ccgccggcctacaccgccgtgtggatctgcgcccacgccactggccacctgcaggccacc
ggccgcgatgcgcgcgggcgcaagcagtaccgctaccacgccgactgggccgcagtgcgc
gacgccggcaagttcgaccgggtgatcgcctttggtgaagcactgcccgcgctgcggcgc
cggctcagccgcgatctcaagcacagcggcttcccccgcgaaaaggtgctggcggtcgtg
gtcgcgctgctggccgacaccttggtgcgggtaggcaatgagtcctacgccaaggaaaac
agatcctttggcctgaccacgctgcgcaaccggcacctcgacctgctgcgcggcgggcgc
gtacggatgcgcttccgcggcaaatccgggcagctgcacgaagtgacggtaggtgaccgc
cggctgggcacgctggtgcgcggcgtgcagcagttgccgggccaggcgttgttccagtat
cgcgacgacgacggtgccatccagccggtcgactccggtgcggtcaacgattacctgcgc
gaggtgatgggcgaggaattcaccgccaaggatttccgcacctggggcggcaccctggcc
gcggtgcaagcgttcgcggccaccgagttgcccgaaccggccagccagcgtgcgctggcc
aaggtacagcgtgaggtggtgtgcaaggtggcgacccagttgggcaatacgcctgcggtg
tgccgcaaggcctacatcgacccgtgcgtgttcgccggctgggagcgcggcgaactggcc
aagctggccggcctgcgtgggccgcgccagtgggaacaggccaccctgcgcgtgctgcgc
agggcgcgccggctcagccgcagtcgtcagccgcagtag
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