Stenotrophomonas maltophilia JV3: BurJV3_0756
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Entry
BurJV3_0756 CDS
T01596
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
buj
Stenotrophomonas maltophilia JV3
Pathway
buj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
buj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BurJV3_0756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
buj03021
]
BurJV3_0756
03400 DNA repair and recombination proteins [BR:
buj03400
]
BurJV3_0756
Enzymes [BR:
buj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BurJV3_0756
Transcription machinery [BR:
buj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BurJV3_0756
DNA repair and recombination proteins [BR:
buj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BurJV3_0756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AEM50090
LinkDB
All DBs
Position
863309..867532
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLNLFNQQRQTLDFDAIKIALASPDLIRSWSFGEVKKPETINYRTFKPERDGLFCAA
IFGPVKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERMGHIDLASPVAHIWFLKSL
PSRIGLMLDMTLRDIERVLYFEAYVVTEPGLTALERRQLLTEEQYLQARQEHGDDFDAAM
GAEAVYELLRTIDLQSEMTRLREEIAATGSETKLKRLTKRIKLIEAFLESGNRPEWMVMT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLRRLLELSAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPY
LRLHQCGLPKKMALELFKPFVFAKLQRRGLATTIKAAKKLVEREEAEVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRSLENKKGEGMAFANIAEVKRAYDNR
VVELHAKVKVRITEVVTDEDGNKQNKTSIVDTTIGRALLAEILPEGLPFALANVELTKKN
ISRLINSSYRQLGLKDTVVFADKLMYTGFAYATRAGVSIGIDDMLIPDEKKGILTEAEAE
VLEIQEQYQSGLVTAGERYNKVVDIWSRTNERIAKAMMDTIGTEKVVNAKGETIDQKSMN
SLYIMADSGARGSQAQIRQLAGMRGLMARPDGSIIETPIKANFREGLNVQEYFNSTHGAR
KGLADTALKTANSGYLTRRLVDVAQDVVITEVDCGTTEGLIMTPIVEGGDVVEPLKDRVL
GRVVAEDVFLPGNDEDPIVTRNTLLDEAWVAKLEDAGVQTIKVRSTISCESAFGVCSRCY
GRDLARGHLVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAVDNITVKTTGSVK
FSNLKSVEHANGSLVAVSRSGEISVLDAHGRERERYKLPYGATITSKDGDAIKAGQTVAN
WDPHNHPIVSEVAGFIRFIDFVDGITVIEKTDELTGLASREITDPKRRGTQAKDLRPIVR
IVDAKGNDLSIPGTDLPAQYLLPPRSIVNLQDGAPVGVGDVVAKIPQEASKTRDITGGLP
RVADLFEARKPKDPAVLAERSGIISFGKDTKGKQRLIIKDTDGSEHEELIPKYRQVIVFE
GEHVTKGETIVDGEPSPQDILRLLGVEPLAAYLVKEIQDVYRLQGVKINDKHIEVITRQM
LRKVEITDQGSSKFLNGEQVERQRVIEENARLSTRNELPAHFDPVLLGITKASLATESFI
SAASFQETTRVLTEAAVRGTSDNLRGLKENVIVGRLIPAGTGLAYHSNRRRGASGLTESE
MQTLAGTPAAVEAPVVEAEAEQASGEE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacctgctcaacctcttcaaccagcagcgccagacgctggacttcgacgcgatc
aagatcgcgctggcctcgccggacctgatccgttcgtggtccttcggcgaagtgaagaag
ccggaaaccatcaactaccgtaccttcaagccggaacgcgacggcctgttctgcgccgcc
atcttcggcccggtgaaggactacgagtgcctgtgcggcaagtacaagcgcatgaagcac
cgcggcgttgtgtgcgaaaagtgcggcaccgaagtgaccctggccaaggtgcgtcgtgag
cgcatgggccacatcgacctggcgtcgccggtcgcgcacatctggttcctgaagtcgctg
ccgtcgcgcatcggcctgatgctggacatgaccctgcgcgacatcgagcgcgtgctgtac
ttcgaagcgtacgtggtgaccgagccgggcctgaccgccctggagcgccgccagctgctg
accgaagaacagtacctgcaggcccgccaggagcacggtgacgacttcgatgccgccatg
ggcgccgaggccgtgtacgaactgctgcgcacgatcgacctgcagtcggaaatgacccgc
ctgcgcgaggaaatcgccgctaccggttcggaaaccaagctcaagcgcctcaccaagcgc
atcaagctgatcgaagccttcctggaatcgggcaaccgtccggaatggatggtcatgacc
gtgctgccggtgctgccgccggacctgcgcccgctggtcccgctggatggcggccgcttc
gcgacctccgacctgaacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctgcgc
cgcctgctcgaactgagcgcgccggacatcatcgtgcgcaatgaaaagcgcatgctgcag
gaatcggtcgatgcgctgctggacaacggccgtcgtggccgtgccatcaccggcaccaac
aagcgcccgctgaagtcgctggccgacatgatcaagggcaagcagggccgcttccgccag
aacctgctcggcaagcgcgtcgactactcgggccgttcggtcatcgtggtcggcccgtac
ctgcgcctgcaccagtgcggcctgccgaagaagatggcgcttgagctgttcaagccgttc
gtctttgccaagctgcagcgtcgtggcctggccaccaccatcaaggccgccaagaagctg
gtcgagcgcgaagaagccgaagtctgggacatcctggaagaggtcatccgcgagcatccg
gtgatgctgaaccgtgcgccgaccctgcaccgtctgggcatccaggcgttcgagccggta
ctgatcgagggcaaggccatccagctgcacccgctggtctgcaccgcgttcaacgccgac
ttcgacggtgaccagatggccgtccacgtgccgctctcgctggaagcccagctggaagcg
cgtgcgctgatgatgtcgaccaacaacatcctgtcgccggccaacggtgagccgatcatc
gtgccgtcgcaggacgtcgtgctgggtctgtactacatgacccgctcgctggagaacaag
aagggcgagggcatggccttcgccaacatcgccgaagtcaagcgcgcctacgacaaccgc
gtggtggaactgcacgccaaggtcaaggtccgcatcaccgaggtggtgaccgacgaagac
ggcaacaagcagaacaagacctcgatcgtggacaccacgatcggtcgcgccctgctggct
gaaatcctgccggaaggcctgccgttcgcgctggccaatgtcgagctgaccaagaagaac
atcagccgcctgatcaactccagctaccgtcagctcggcctgaaggacacggtcgtgttc
gccgacaagttgatgtacaccggtttcgcctatgcgacccgcgccggcgtctcgatcggc
atcgacgacatgctgatcccggacgagaagaagggcatcctcaccgaggccgaagccgaa
gtgctggaaatccaggagcagtaccagtcgggcctggtcaccgccggcgagcgctacaac
aaggtggtcgacatctggtcgcgcaccaacgagcgcatcgccaaggcgatgatggacacc
atcggtaccgagaaggtcgtcaatgccaagggcgagaccatcgaccagaagtcgatgaac
tcgctgtacatcatggccgactccggtgcgcgtggttcgcaggcgcagatccgtcagctg
gccggcatgcgtggcctgatggcccgcccggacggctcgatcatcgagacgcccatcaag
gcgaacttccgtgaaggcctgaacgtgcaggagtacttcaactccacccacggtgcccgt
aagggtctggccgataccgcgctgaagaccgcgaactccggttacctgacccgtcgcctg
gtcgacgtcgcgcaggacgtggtgatcaccgaggtggattgcggtaccaccgaaggcctg
atcatgaccccgatcgtggaaggcggcgacgtggtcgagccgctgaaggaccgcgtgctg
ggccgcgtggtcgccgaggacgtgttcctgccgggcaacgacgaagatccgatcgtcacc
cgcaacaccctgctggacgaagcctgggttgccaagctggaagatgccggcgtgcagacc
atcaaggtccgctcgaccatctcctgtgaatcggccttcggtgtctgctcgcgctgctac
ggccgcgacctggcccgtggccacctggtcaacatcggtgaagcggtcggcgtcatcgcc
gcccagtccatcggtgagccgggtacccagctgaccatgcgtacgttccacatcggtggt
gcggcgtcgcgagctgctgcggtcgacaacatcaccgtcaagaccaccggctcggtcaag
ttcagcaacctcaagtcggtcgagcacgccaacggctcgctggtggcggtgtcgcgctcg
ggcgaaatctcggtgctcgatgcgcacggccgtgagcgtgagcgttacaagctgccgtac
ggtgcaaccatcacgtccaaggacggcgatgcgatcaaggcgggccagaccgtggccaac
tgggatccgcataaccacccgatcgtgtcggaagtggccggcttcatccgcttcatcgac
ttcgtcgacggcattaccgtcatcgagaagaccgacgagctgaccggcctggcgtcgcgc
gagatcaccgatccgaagcgtcgtggtacccaggccaaggacctgcgcccgatcgtgcgc
atcgttgatgccaagggcaacgacctgtcgatcccgggcaccgacctgccggcgcagtac
ctgctgccgccgcgttcgatcgtcaacctgcaggatggcgccccggtgggcgtgggcgac
gtcgtcgccaagatcccgcaggaagcgtcgaagacccgcgacatcaccggtggtctgccg
cgcgtggccgacctgttcgaagcgcgcaagccgaaggatccggcggtgctggccgagcgt
tcgggcatcatcagcttcggcaaggacaccaagggcaagcagcgcctgatcatcaaggac
accgatggttcggagcacgaagagctgatcccgaagtaccgccaggtcatcgtgttcgaa
ggcgagcatgtcaccaagggtgagaccatcgtggacggcgagccgagcccgcaggacatc
ctgcgtctgctgggtgtcgaaccgctggcggcctacctggtgaaggaaatccaggacgtg
taccgcctgcagggcgtgaagatcaacgacaagcacatcgaggtgatcacccgccagatg
ctgcgcaaggtcgagatcaccgaccagggcagcagcaagttcctgaacggcgaacaggtg
gagcgtcagcgcgttatcgaggaaaatgcgcgcctgtcgacccgcaacgagctgccggcg
cacttcgatccggtcctgctgggtatcaccaaggcgtcgctggcgaccgaatcgttcatc
tcggccgcgtcgttccaggaaaccacccgcgtgctgaccgaagcggctgtccgcggcacc
tcggacaacctgcgtggcctgaaggaaaacgtcatcgtgggtcgcctgattccggccggt
accggcctggcgtaccacagcaaccgccgccgcggcgcttccggtctcaccgagtcggaa
atgcagaccctggccggcaccccggccgcggtcgaggcgccggtggttgaagccgaagct
gaacaggcgtcgggcgaagaatga
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integrated database retrieval system
