Stenotrophomonas maltophilia JV3: BurJV3_0786
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Entry
BurJV3_0786 CDS
T01596
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
buj
Stenotrophomonas maltophilia JV3
Pathway
buj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
buj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BurJV3_0786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
buj03021
]
BurJV3_0786
03400 DNA repair and recombination proteins [BR:
buj03400
]
BurJV3_0786
Enzymes [BR:
buj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BurJV3_0786
Transcription machinery [BR:
buj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BurJV3_0786
DNA repair and recombination proteins [BR:
buj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BurJV3_0786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AEM50120
LinkDB
All DBs
Position
885220..886218
Genome browser
AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLTDTRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLQEDVLEVLLNLKDVAIRMHSGDSATLSLSKQGPGVVTAADIKVDHN
VEILNGDHVICHLTKDTAINMRLKIERGFGYQPAAARRRPDEETRAIGRLVLDASFSPVR
RVAYAVEAARVEQRTDLDKLVIDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
AKPANNGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLSLGMKLENWPPAGVASHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaaccaggttctgcgtcctcgcggtccgcagatcgaacgccttacc
gacacccgtgcaaaggtcgttatcgaacctttggagcggggttacgggcatacgctgggc
aacgccctgcgtcgcgtgctgctgtcgtccatcccgggcttcgccatcacggaagtcgaa
atcgacggcgtgttgcatgagtacaccacggtcgaaggtctgcaggaggacgtgctcgaa
gtcctgctcaacctgaaggatgtggccatccgtatgcactccggcgacagcgccaccctg
tccctgtccaagcagggcccgggcgttgtcaccgctgccgacatcaaggtcgaccacaat
gtggagatcctgaacggcgaccatgtgatctgccacctgaccaaggacacggcaatcaac
atgcgtctgaagatcgaacgtggtttcggctaccagccggctgccgcgcgtcgtcgtccg
gacgaagaaacccgtgccatcggccgcctggtcctggatgcctcgttctcgccggtccgc
cgcgtcgcctatgccgtggaagcggcccgcgtcgaacagcgtaccgacctggacaagctg
gtcatcgatatcgagaccaacggcaccatcgacgccgaggaagccgtgcgcaccgctgcc
gacatcctcagcgaccagctgtcggtgttcggtgacttcacccaccgtgaccgcggtgcg
gccaagccggccaacaacggcgtggatccggtgctgctgcgcccgatcgacgatctggag
ctgaccgtgcgttcggccaactgcctgaaggctgaaagcatctactacatcggcgatctg
atccagaagaccgaagtggagctgctgaagaccccgaacctgggcaagaagtcgctcacc
gagatcaaggaagtgctggctcagcgcggcctgtccctcggcatgaagctggagaactgg
ccgccggccggcgtcgccagccacggcatgctgggctga
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