Stenotrophomonas maltophilia JV3: BurJV3_1241
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Entry
BurJV3_1241 CDS
T01596
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
buj
Stenotrophomonas maltophilia JV3
Pathway
buj03030
DNA replication
buj03430
Mismatch repair
buj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
buj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BurJV3_1241
03430 Mismatch repair
BurJV3_1241
03440 Homologous recombination
BurJV3_1241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
buj03032
]
BurJV3_1241
03400 DNA repair and recombination proteins [BR:
buj03400
]
BurJV3_1241
Enzymes [BR:
buj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BurJV3_1241
DNA replication proteins [BR:
buj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BurJV3_1241
DNA repair and recombination proteins [BR:
buj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BurJV3_1241
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AEM50573
LinkDB
All DBs
Position
complement(1396910..1400500)
Genome browser
AA seq
1196 aa
AA seq
DB search
MSNSRFVHLHVHTEFSLADSTIRVPAKPDQADPKKAKQANLLSRSVELGLPALAVTDLNN
LFALVKFYKAAEGVGIKPIAGADVLIAEEGQDPWRMTLLCRDREGYLSLSRLLTRAWMEG
HRPEGGVAVHPDWLKAGNANLFALAGRQSLAGRLALDGKHELAEQQLADWQRVFGDGLHL
ELTRTGREGEETFNQFALMAAGQRGLPVVASNDVRFLSPSDFSAHEARVCISTGRVLDDP
KRPREYSDQQYLKSAEEMCALFADIPDAIDNTLALAERCNIEMRLGTYFLPNYPVPDDET
LDTWIQKMSRDGLEERLEKNPLAPGKTREEYFERLEFELNTIIKMGFPGYFLIVADFIQW
GKNQGIPIGPGRGSGAGSLVAWALKITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMDR
RDEVIDYVARKYGRERVSQIITYGTMAAKAVVRDSGRVLGFPYGLVDGVSKLIPNILGIH
LKDALGKGKEGPSSEMASAELIQRYETEDDVRDLIDLALQLEDLTRNAGKHAGGVVIGPE
PLSEFCPLYAEHDENGLGKNPVTQFDKNDVEEVGLVKFDFLGLRTLTIIDWAVKAINKRH
ERAGIPPVDIAAIPLDDTPTYKDIFANGNTGAVFQFESSGMRRLLKDARPDRFEDLIALV
SLYRPGPMDLIPSFNARKHGQEEIIYPDPRTEAILKDTYGIMVYQEQVMQMAQIVGGYSL
GGADLLRRAMGKKVPAEMAKHREIFREGAAKDGVDEAKADAIFDLMEKFAGYGFNKSHAA
AYALVSYQTAWLKRHYPAEFMAATLSSDLDNTDKVVGFLDEVRNLGLTVLPPKVNQSAFM
FEAVTPDTIQYGLGAIKGVGQGACEAVVDERLKGGEYKDLLDFCTRVGSAKLNRRTLEAM
INCGALDELGHNRASLMLQLPEVIKATDQMARERASGQNSLFGGPDPSATTIQLDLPEAE
EWPLLQRLNGERDTLGFYLSGHPFDPWRDDVRDLVGNDLGAVEKIWSANSGGGGGGEKRW
RPEVQTVLAGQVVGVRRKGESQIFIQLEDGRGRVECSAFSDAMAEFGHLMTKDRILVVKG
GLREDEFNGGFALRIRQCWDFDEVCANYATRLSLRLDLRQQRPVWERIDALLDRHRPGRT
PLRLDLLLKGPHGGVAGMLDVSGQSAVRIDSKLMEALRADPAVRTLKVRYSPPWAS
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtccaactcccgcttcgtacatctccacgtccacaccgagttctcgctggcggactcg
accatccgcgtgccggccaagcccgaccaggcggacccgaagaaggccaagcaggccaac
ctgctgtcgcgctcggtcgaactcggcctgcccgcgctggcggtgaccgacctcaacaac
ctgttcgccctggtcaagttctacaaggcggccgaaggcgtgggcatcaagccgatcgcc
ggcgccgacgtgctgatcgccgaggaaggccaggacccgtggcggatgaccctgctgtgc
cgcgatcgcgagggctacctgagcctgtcgcgcctgctgacccgcgcctggatggaaggg
catcgcccggaaggcggcgtggccgtgcacccggactggctgaaggccggcaacgccaac
ctgttcgcgctggccggccggcagagcctggccgggcgcctggcgctggacggcaagcat
gaactggccgagcagcagctggccgactggcagcgcgtgttcggcgatggcctgcacctg
gagctgacccgcaccggccgcgagggcgaggaaaccttcaaccagttcgcgctgatggcc
gccggccagcgcggcctgccggtggtggccagcaacgacgtgcgcttcctgtcaccgtcg
gacttcagcgcgcacgaagcgcgcgtgtgcatttccaccggccgcgtgctggacgacccc
aagcgcccgcgcgaatacagcgaccagcagtacctgaagtcggccgaggagatgtgcgcg
ctgttcgccgacattcccgatgcgatcgacaacacgctggcgctggccgagcgctgcaac
atcgagatgcggctgggcacctacttcctgcccaactacccggtgccggacgacgaaacc
ctggacacctggatccagaagatgtcgcgcgacggcctggaagagcgcctggagaagaat
ccgctggcgccgggcaagacccgcgaagagtacttcgagcgcctggaattcgagctcaac
accatcatcaagatgggcttcccgggctacttcctgatcgtggccgacttcatccagtgg
ggcaagaaccagggcattccgatcggccccggccgtggttcgggtgctggttcgctggtg
gcgtgggcgctgaagatcaccgatctggatccgctgccgtacaacctgctgttcgagcga
ttcctcaatcccgaacgcgtgtcgatgcccgacttcgacatcgacttctgcatggaccgc
cgcgacgaggtgatcgactacgtcgcacgcaagtacgggcgcgagcgcgtcagccagatc
atcacctacggcaccatggccgccaaggcggtggtgcgcgactccggccgcgtgctcggc
ttcccgtacggcctggtcgacggtgtctccaagctgatcccgaacatcctcggcatccac
ctgaaggatgcgctgggcaagggcaaggaaggcccgagctcggaaatggcctcggccgaa
ctgatccagcgctacgagaccgaggacgatgtccgcgacctgatcgatctggcgctgcag
ctggaagacctgacccgcaacgccggcaagcacgccggtggcgtggtgatcgggcccgag
ccgctgagcgagttctgcccgctgtacgccgaacacgacgagaacggactcggcaagaac
ccggtcacccagttcgacaagaacgacgtggaagaagtgggcctggtgaagttcgacttc
ctgggcctgcgcacgctgaccatcatcgactgggcggtgaaggcgatcaacaagcgccat
gagcgcgccggcatcccgccggtggacatcgccgcgatcccgctggacgacacgcccacc
tacaaggacatcttcgccaacggcaataccggcgcggtgttccagttcgaatcctcgggc
atgcgccgcctgctgaaggatgcgcgccccgaccgcttcgaagacctgatcgcgctggtg
tcgctgtaccgacctggcccgatggacctgattccctccttcaacgcgcgtaagcacggc
caggaagaaatcatctatcccgatccgcgcaccgaagcgatcctgaaggacacctacggc
atcatggtgtaccaggagcaggtgatgcagatggcgcagatcgtcggcggctactcgctg
ggcggcgccgacctgctgcgccgcgcgatgggcaagaaggtgccggcggaaatggccaag
caccgcgagatcttccgcgaaggcgcggccaaggacggcgtggacgaggccaaggccgat
gcgatcttcgacctgatggagaagttcgccggttacggcttcaacaagtcccacgccgct
gcctacgcgctggtcagctaccagaccgcctggctgaagcgccactacccggccgagttc
atggccgccacgctgtcttccgacctcgacaacaccgacaaggtggtcggcttcctcgac
gaggtgcgcaacctcggcctgaccgtgctgccgccgaaggtgaaccagtccgccttcatg
ttcgaggcggtgacgcctgacaccatccagtacggcctgggcgcgatcaagggcgtcggc
cagggtgcctgcgaagcggtggtcgacgaacgcctgaagggcggcgagtacaaggacctg
ctcgacttctgcacccgcgtcggttcggccaagctcaaccggcgcacgctggaagcgatg
atcaactgcggcgcactggatgagctcggccacaaccgcgcctcgctgatgctgcagctg
cctgaggtgatcaaggccaccgaccagatggcgcgcgaacgtgcgtcgggccagaactcg
ctgttcggcggccccgacccgagcgcgaccacgatccagctggacctgcccgaagccgag
gaatggccgctgttgcagcgcctcaatggcgagcgcgacacgctgggcttctacctcagc
ggccacccgttcgacccctggcgcgacgacgtgcgcgacctggtcggcaacgacctgggc
gcggtggagaagatctggagcgccaacagcggtggcggtggtggcggcgaaaagcgctgg
cgcccggaagtgcagaccgtgctggccggccaggtggtcggcgtgcgccgcaagggtgag
agccagatcttcatccagctcgaggacggccgtggccgcgtcgagtgcagcgcgttctcc
gacgcgatggccgaattcggccacctgatgaccaaggaccgcatcctggtggtcaagggt
ggcctgcgcgaggacgaattcaacggcggcttcgcgctgcgcatccgccagtgctgggac
ttcgacgaagtctgcgccaactacgccacgcggctgtcgctgcgcctggacctgcgccag
cagcgcccggtctgggagcgcattgacgccctgctcgaccgccatcgccccgggcgaacg
ccgctgcgcctggacctgctgctgaaggggccgcacggtggcgtcgccggcatgctcgat
gtgtccgggcagagcgcggtgcgcatcgattccaagctgatggaggcgctgcgcgccgac
ccggccgtgcgcacgttgaaggtgcgctacagcccgccctgggccagctga
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