Stenotrophomonas maltophilia JV3: BurJV3_2488
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Entry
BurJV3_2488 CDS
T01596
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
buj
Stenotrophomonas maltophilia JV3
Pathway
buj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
buj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BurJV3_2488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
buj03019
]
BurJV3_2488
03009 Ribosome biogenesis [BR:
buj03009
]
BurJV3_2488
Messenger RNA biogenesis [BR:
buj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BurJV3_2488
Ribosome biogenesis [BR:
buj03009
]
Eukaryotic type
Pre-60S particles
RNases
BurJV3_2488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Annexin
Motif
Other DBs
NCBI-ProteinID:
AEM51808
LinkDB
All DBs
Position
complement(2747898..2748470)
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AA seq
190 aa
AA seq
DB search
MADNGAANERLIWIDLEMTGLDTDNDSIIEIATVVTDAQLNVLAEGPEFAIHHPLETLEA
MDEWNRNQHRRSGLWQRVVDSTTTLGQAEAQTVNFLAQWIPASLSPMCGNSICQDRRFLH
RQMPRLEKYFHYRNLDVSTVKELAKRWAPSVAAGVGKNSNHTALSDVHDSIAELRHYRQF
MGALSGLPAA
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacggcgcggccaacgaacgattgatctggatcgacctggaaatgaccggg
ttggataccgacaacgattcgatcatcgagatcgccaccgtggtcaccgatgcccagctg
aacgtattggccgaaggtccggagttcgccatccaccacccgcttgaaacgctggaagcg
atggatgagtggaaccgcaaccagcatcgccgttcgggcctgtggcagcgcgtggtggac
agcaccaccaccctgggccaggccgaggcgcagacggtgaacttcctggcgcagtggatc
ccggccagcctgtcgccgatgtgcggcaactcgatctgccaggaccgccgcttcctgcac
cgccagatgccgcgcctggagaagtacttccactaccgcaacctggacgtgtccacggtg
aaggaactggccaagcgctgggcaccgagcgtggccgcaggcgtcggcaagaacagcaat
cacaccgcgctgagcgacgtgcacgattcgatcgccgagctgcgccactaccgccagttc
atgggcgcgctgtcgggcctgccggctgcctga
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