Stenotrophomonas maltophilia JV3: BurJV3_2613
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Entry
BurJV3_2613 CDS
T01596
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
buj
Stenotrophomonas maltophilia JV3
Pathway
buj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
buj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BurJV3_2613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buj03400
]
BurJV3_2613
Enzymes [BR:
buj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
BurJV3_2613
DNA repair and recombination proteins [BR:
buj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BurJV3_2613
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BurJV3_2613
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BurJV3_2613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AEM51933
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All DBs
Position
2875930..2877369
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AA seq
479 aa
AA seq
DB search
MADSFLFYDLETFGQDPRRTRISQYAAIRTDADLNEIDTPVSFFVRPADDLLPSPMATLV
TGITPQQALAEGISEAEAFDRINEQLSRPGTCALGYNTLRFDDEFVRYGLFRNFHDPYER
EWRNGNSRWDLLDMLRLMRAMRPDGIQWPLREDGATSFKLEHLAEANNVREGDAHEALSD
VRATIGMARLFKQSQPRLWDYALKLRDKRFVGSLLDVAAMKPVLHISMRYPASRLCAAPV
LPLAVHPTINNRVIVFDLEGEIDDLLELPAEVIAQRLYMRASELPEGVARVPLKEVHLNK
VPALIAWNHLRADDHARLGLDVAAIEAKVERLRAFAPQLAEKARQVYNQPRAATVADVDA
SLYDGFLGNGDKPLLALARTTAPEQLAALEGRFRDPRLPELLFRYRARNHPDSLAPAERQ
RWQDYRRQRLLGDGGLGELNLPQYQQQLDALAAEAPDDARRQALLQSLRDWGQHLQETL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccgacagcttcctgttctacgacctggaaaccttcggccaggacccgcggcgcacg
cgcatctcgcagtacgccgcgatccgtaccgacgccgacctcaacgaaatcgacaccccg
gtcagcttcttcgtgcgcccggccgatgacctgctgccctcgccgatggccaccctggtc
accggcatcaccccgcagcaggccttggccgaaggcatcagcgaggccgaggccttcgac
cgcatcaacgagcagctgtcgcgccccggcacctgcgcgctgggctacaacacgctgcgc
ttcgacgatgaattcgtccgctacggcctgttccgcaacttccatgacccgtacgagcgc
gagtggcgcaacggcaattcgcgctgggacctgctggacatgctgcggctgatgcgcgcg
atgcgcccggacggcatccagtggccgctgcgcgaggatggcgccacttcgttcaagctc
gagcacctggccgaggccaacaacgtgcgcgagggcgatgcccacgaagcgctgtccgac
gtacgcgccaccatcggcatggcgcgcctgttcaagcaatcgcaaccacgcctgtgggac
tacgcgctgaagctgcgtgacaagcgcttcgtcggcagcctgctggacgtggccgcgatg
aagccggtgctgcacatttccatgcgctacccggccagccgcctgtgtgcggccccggtg
ctgccgctggccgtgcacccgaccatcaacaaccgggtgatcgtgttcgacctggaaggc
gagatcgacgacctgctggaactgccggccgaggtgatcgcgcagcgcctgtacatgcgc
gccagcgaactgcccgaaggcgtggcgcgggtgccgctgaaggaagtgcacctgaacaag
gtgcccgcgctgatcgcctggaaccacctgcgcgccgatgaccacgcgcgcctcggcctg
gacgtggccgcgatcgaagccaaggtggaacgcctgcgcgcgttcgccccacagctggcc
gagaaggcccggcaggtctacaaccagccccgcgccgccaccgtggccgacgtcgatgcc
tcgctgtacgacggcttcctcggcaatggcgacaagccgctgcttgcactggcacgcacc
accgcgccggagcagctggccgcgctggaaggccgtttccgcgacccgcgcctgccggag
ctgctgttccgctaccgcgcacgcaaccaccccgacagcctcgcgccggcggaacgccag
cgctggcaggattaccgccgccagcgcctgctcggcgacggcgggctgggcgaactcaac
ctgccccagtaccagcagcagctcgatgcactggccgccgaagcgcccgacgacgcccgg
cgccaggccctgctgcaatcgctgcgcgactggggccagcacctgcaggagacgctgtga
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