Stenotrophomonas maltophilia JV3: BurJV3_3158
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Entry
BurJV3_3158 CDS
T01596
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
buj
Stenotrophomonas maltophilia JV3
Pathway
buj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
buj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BurJV3_3158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buj03400
]
BurJV3_3158
Enzymes [BR:
buj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BurJV3_3158
DNA repair and recombination proteins [BR:
buj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BurJV3_3158
RecFOR pathway proteins
BurJV3_3158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
AAA_3
Mg_chelatase
AAA_22
nSTAND3
AAA_33
TIP49
AAA_14
TsaE
Bac_DnaA
NTPase_1
RNA_helicase
AAA_2
Rad17
AAA_18
DUF815
NB-ARC
AAA_17
AAA_28
AAA_24
ABC_tran
DUF87
Sigma54_activ_2
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AEM52476
LinkDB
All DBs
Position
complement(3487479..3488519)
Genome browser
AA seq
346 aa
AA seq
DB search
MTDDRIIGAGATREDDAADASIRPKRLADYLGQAPVREQLEIYIEAAKARGDALDHVLIF
GPPGLGKTTLSHVIANELGVALRVTSGPVIEKAGDLAALLTNLQPHDVLFVDEIHRLSPV
VEEVLYPAMEDFQIDIMIGEGPAARSIKIDLPPFTLIGATTRAGLLTAPLRDRFGIVQRL
EFYSVEELTRIVRRSATILGIDCTADGAGEIARRARGTPRIANRLLRRVRDYAQVKAGGH
IDEAVAQAAMKMLKVDPEGFDELDRRLLKTMVDYFDGGPVGIESLAAALSEERGTLEDVV
EPYLIQQGFLVRTARGRMATHKAYRHMGLKPKNPPQDLFAEVPDVG
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgaccgcatcatcggcgccggcgccacccgcgaggatgacgccgccgacgcc
agcatccgccccaagcgcttggccgactacctcggccaggccccggtgcgcgagcagctg
gagatctacatcgaagcggccaaggcccgtggcgacgcgctcgaccatgtgctgatcttc
ggcccgcccggcctgggcaagaccaccctcagccacgtcatcgccaacgaactgggcgtg
gccctgcgggtcacctccggcccggtgatcgagaaggccggcgacctcgccgcactgctc
accaacctgcagccgcacgacgtgctgttcgtggacgagatccaccgcctgtcgccggtg
gtcgaggaagtgctgtacccggcgatggaagacttccagatcgacatcatgatcggcgaa
ggccccgcggcccgttcgatcaagatcgacctgccgccgttcaccctgatcggcgccacc
acccgcgccggcctgctgaccgcgccgctgcgcgaccgcttcggcatcgtccagcgcctg
gagttctacagcgttgaagagctgacccggatcgtgcgccgctcggccaccatcctcggt
atcgactgtaccgccgatggcgccggcgagatcgcacgccgcgcgcgtggcaccccgcgt
atcgccaaccgcctgctgcgccgcgtgcgcgattatgcgcaggtgaaggcgggcggccac
atcgacgaggccgtggcacaggccgcgatgaaaatgctcaaggttgatccggagggcttc
gacgagctcgaccggcgcctgctcaagaccatggtcgactacttcgacggcggcccggtc
ggcatcgaatcgctggccgcggcgctgtccgaagagcgcggcacgctggaagacgtggtc
gagccctacctgatccagcagggcttcctggtgcgcaccgcgcgcggccgcatggccacc
cacaaggcctaccggcacatgggcctgaagccgaagaacccgccgcaggacctgttcgcg
gaggttcccgatgtcggttga
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