KEGG   Stenotrophomonas maltophilia JV3: BurJV3_3985
Entry
BurJV3_3985       CDS       T01596                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
buj  Stenotrophomonas maltophilia JV3
Pathway
buj03030  DNA replication
buj03410  Base excision repair
buj03420  Nucleotide excision repair
buj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:buj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BurJV3_3985
   03410 Base excision repair
    BurJV3_3985
   03420 Nucleotide excision repair
    BurJV3_3985
   03440 Homologous recombination
    BurJV3_3985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:buj03032]
    BurJV3_3985
   03400 DNA repair and recombination proteins [BR:buj03400]
    BurJV3_3985
Enzymes [BR:buj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BurJV3_3985
DNA replication proteins [BR:buj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BurJV3_3985
DNA repair and recombination proteins [BR:buj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     BurJV3_3985
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BurJV3_3985
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: AEM53297
LinkDB
Position
complement(4406421..4409195)
AA seq 924 aa
MSRLVLIDGSSYLYRAFHALPPLSNAQGEPTGALFGVVNMLRSTLKERPAYVAFVVDAPG
KTFRDDLYEQYKANRPPMPDELRSQVEPMCRIVEALGISILRIPGVEADDVIGTLALQGL
AQDLKVTISTGDKDFAQLVRPGIELVNTMTGSRMDSDAAVMEKFGVRADQIIDLLALMGD
TVDNVPGVEKCGPKTAAKWLAEYQHLDGVMAAAPTMKGKIGENLRAALERLPLNRELVTI
RTDVELDASPTTLALREQDVPALTELYTRYGFTQALKELGAPLPAPAAASEATPSLRGTA
AGFARGSAEAPAAGTLDPALAAPGEYETVLTSEQLQAWVERLQQADLISFDTETDALDAM
RAHLVGVSLAVEPGKAAYIPVGHDYPGAPAQLPMQQVLDALRPVLQDPAKKKLGQHGKYD
LHVLRRHGVDVQGYHDDTMLESFVLNSTATRHDMDSLALRYLGYSTIKFEDVAGKGAKQI
PFSQVGIDEASRYAAEDADVTLRLHRALQPQLLAEPALDSVYRDIEMPLVPVLTTIEANG
VRIDTDELRRQSQDLSSRMLAAQQKATELAGRSFNLDSPKQLQAVLFDELKLPAVVKTPK
GQPSTNEEALEAIADQHELPRVILDYRGLAKLRSTYTDKLPEMVNPDTGRVHTSYHQSGA
ATGRLSSSDPNLQNIPIRTEDGRRIRRAFIAPEGFQLLAADYSQIELRIMAHLSEDPGLV
RAFEQGADVHRATAAEVFGRTLEEVTPNERRAAKAINFGLMYGMSAFGLARNLGIDRGQA
QDYVALYFSRYPGVRDFMERMRQQARDQGYVETLFGRRLYLNDIHARNQGLRAGAERAAI
NAPMQGTAADIIKRAMVDVDQWLRDSGAPARMILQVHDELVFETESSFVEDLRLQVVERM
SQAAKLRVPLVVDTGIGNNWDEAH
NT seq 2775 nt   +upstreamnt  +downstreamnt
atgagcagattagtcctgatcgacgggtccagttacctgtaccgcgcgttccacgcgctg
ccgcccctgtccaatgcacagggtgaacccaccggcgcgctgttcggcgtggtcaacatg
ctgcgctcgacgctgaaggagcgcccggcctacgtggcgttcgtggtcgacgcgccgggc
aagaccttccgcgacgacctgtacgagcagtacaaggccaaccgcccgccgatgcccgat
gagctgcgcagccaggtcgagccgatgtgccgcatcgtcgaggcgctgggcatcagcatc
ctgcgcatccccggcgtggaagccgacgatgtgatcggcacgctggccctgcagggcctg
gcgcaggacctgaaggtgaccatttccaccggcgacaaggactttgcccagctggtgcgc
ccgggcatcgagctggtcaacaccatgaccggcagccgcatggattcggacgcggcggtg
atggagaagttcggcgtgcgcgccgaccagatcatcgacctgctggcgctgatgggcgac
accgtcgacaacgtgccgggcgtggagaagtgcgggccgaagaccgctgccaagtggctg
gccgagtaccagcacctggacggggtgatggcggccgcgccgaccatgaagggcaagatc
ggcgagaacctgcgcgccgcgctggagcgcctgccgctgaaccgcgagctggtgaccatc
cgcaccgacgtggagctggacgccagcccgaccacgctggccctgcgcgagcaggacgtg
ccggcgctgaccgagctgtatacgcgctacggcttcacccaggcgctgaaggaactgggt
gcgccgctgccggcgccggctgccgccagcgaggccaccccgagcctgcgcggtaccgcg
gcaggcttcgcccgtggcagcgccgaggcaccggctgccggcacgctggatccggcgctg
gccgcaccgggtgaatacgagaccgtgctgaccagcgagcagctgcaggcctgggtcgag
cgcctgcagcaggccgatctgatcagcttcgataccgaaaccgatgcgctggacgcgatg
cgcgcgcacctggtcggtgtcagcctggcggtcgagccgggcaaggccgcctacattccg
gtcggccacgattacccgggtgcaccggcgcagctgccgatgcagcaggtgctggatgcg
ctgcgcccggtgctgcaggacccggcgaagaagaagctgggccagcacggcaagtacgac
ctgcatgtgctgcgccgccacggcgtggacgtgcagggctaccacgacgacaccatgctc
gagagcttcgtgctcaattccaccgccacccgccacgacatggattcgctggccctgcgt
tacctgggctacagcaccatcaagttcgaggacgtggccggcaagggcgccaagcagatt
ccgttctcgcaggtgggcatcgacgaagccagccgctatgcggccgaggacgccgacgtc
accctgcgcctgcaccgcgcgctgcagccgcagctgctggccgagccggcgctggacagc
gtgtaccgcgacatcgagatgccgctggtgccggtgctgaccacgatcgaagccaatggc
gtgcggatcgacaccgacgaactgcgccggcagagccaggacctgtcctcgcgcatgctg
gccgcacagcagaaggccaccgagctggccggccgcagcttcaacctggattcgcccaag
cagctgcaggcggtgctgttcgacgagctgaagctgccggcggtggtgaagaccccgaag
ggccagcccagcaccaatgaagaggcactggaggcgattgccgaccagcacgagctgccg
cgggtgatcctggactaccggggcctggccaagctgcgcagcacctacaccgacaagctg
ccggagatggtcaacccggacaccggccgggtgcataccagctatcaccagtccggtgcc
gccaccggccgcctgtcctcgtcggacccgaacctgcagaacatcccgatccgcaccgag
gacggccgccgcatccgccgcgcgttcatcgccccggagggcttccagctgctggcggcc
gactattcgcagatcgagctgcggatcatggcccacctgtccgaggacccgggcctggta
cgtgccttcgagcagggcgccgacgtgcaccgtgccaccgctgccgaggtgttcgggcgc
acgctggaggaggtgaccccgaacgagcgccgtgccgccaaggcgatcaacttcggcctg
atgtacggcatgagcgccttcggactggcccgcaacctgggcatcgaccgtggccaggcg
caggactacgtggcgctgtacttcagccgctacccgggcgtgcgcgacttcatggagcgg
atgcgccagcaggcccgtgaccagggctacgtggaaaccctgttcggccgtcgcctgtac
ctgaacgacatccacgcccgcaaccagggcctgcgtgctggtgctgaacgtgcggcgatc
aacgcgccgatgcagggcaccgccgccgacatcatcaagcgcgcgatggtggacgtggac
cagtggctgcgtgacagtggggcaccggcgcggatgatcctgcaggtgcacgatgaactg
gtgttcgaaaccgaaagcagtttcgtggaagacttgcgtttgcaggtggtggagcgcatg
tcgcaagcggccaaactgcgggtgccgctggtggtcgataccggcatcggcaacaactgg
gacgaagcgcactga

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