Stenotrophomonas maltophilia JV3: BurJV3_3991
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Entry
BurJV3_3991 CDS
T01596
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
buj
Stenotrophomonas maltophilia JV3
Pathway
buj03420
Nucleotide excision repair
buj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
buj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BurJV3_3991
03430 Mismatch repair
BurJV3_3991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buj03400
]
BurJV3_3991
Enzymes [BR:
buj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BurJV3_3991
DNA repair and recombination proteins [BR:
buj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BurJV3_3991
MMR (mismatch excision repair)
Other MMR factors
BurJV3_3991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AEM53303
LinkDB
All DBs
Position
complement(4412354..4414546)
Genome browser
AA seq
730 aa
AA seq
DB search
MDVSHLLDGLNPAQREAVSAPPGHHLVLAGAGSGKTRVLTHRIAWLHEVDGVPTHGIFAV
TFTNKAAGEMRHRIDAQLPNGSRGMWIGTFHGLANRLLRLHWQDAKLPEGFQVMDSDDQL
RLVKRVVQALELDDGKYPAKQIAWWINAQKDEGRRPQHIQPEPHDAWLETMRQAYIEYQA
RCDRAGLVDFAELLLRAHELLRDNPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGD
SGHVFVVGDDDQAIYGWRGAKVENVQGFLRDFPGAQTIRLEQNYRSTANILGAANAVIAH
NPDRIGKQLWTDSGDGEPIDLYAAYNEMDEARYIVERARQWVRDGGSYTEVAVLYRSNAQ
SRALEEALLSEQVPYRVYGGMRFFERAEIKDALAYLRLLSNRNDDAAFERAVNTPTRGIG
DRTLDEVRREARAQGISLWEATMLVTQGSALAARARNALAGFLVLVNELQAQTLHMTLAE
RVDHVLARSQLREHWSKESRNALDSESRTDNLDELVSVASRFVRRADDIEEVGEDMDELV
AFLAYAALEAGEGQAQAGEEGVQLMTLHSAKGLEFPLVFLAGLEEGLFPSARSLEESGRL
EEERRLAYVGITRARQKLVLSYAESRRIHGQDNYSLPSRFLREIPRELLHEVRPKVQVSR
PASMGASRVMGHASIEAPPIKLGALVTHPKFGEGMVTDYEGNGAHARVQVEFAGAGSKWL
VMAYANLTVI
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcccacctgcttgatggcctgaacccggcccagcgcgaagccgtctccgct
ccccccggccaccacctggtgctggccggtgccggttccggcaagacccgcgtactcacc
caccgcatcgcctggctgcatgaagtcgatggcgtgccgacccacggcattttcgcggtg
accttcaccaacaaggcggccggcgaaatgcgccaccgcatcgacgcacagctgcccaat
ggcagccgtggcatgtggatcggcaccttccacggcctggccaatcgcctgctgcgcctg
cactggcaggacgcgaagctgccggagggcttccaggtgatggattcggacgaccagctg
cggctggtcaagcgggtggtgcaggcgctggaactggacgacggcaagtacccggccaag
cagatcgcgtggtggatcaacgcgcagaaggacgaaggtcgccgcccgcagcacatccag
cccgagccgcacgacgcctggctggaaaccatgcgccaggcctacatcgagtaccaggca
cgctgcgaccgcgccggcctggtcgacttcgccgagctgctgctgcgcgcgcacgaactg
ctgcgcgacaacccggccctgctggcgcactaccgcgcccgcttccgcgagatcctggtg
gacgagttccaggacaccaacgccatccagtacgccttcgtgcgcgtgctggccggcgat
tccggccacgtgttcgtggtcggcgacgatgaccaggccatctacggttggcgcggtgcc
aaagtcgagaacgtgcagggcttcctgcgcgacttcccgggcgcgcagaccatccgcctg
gaacagaactaccgctccaccgccaacatcctcggcgccgccaatgcggtgatcgcgcac
aacccggaccgcatcggcaagcagttgtggaccgacagtggcgacggcgagccgatcgat
ctgtacgcggcgtacaacgagatggacgaggcacgctacatcgtcgagcgcgcgcgccag
tgggtgcgtgacggtggcagctacaccgaagtggccgtgctctaccgcagcaatgcgcag
tcgcgcgcgctggaagaagcgctgctgagcgaacaggtgccgtaccgcgtatacggcggc
atgcgcttctttgagcgtgccgaaatcaaggacgcgctggcctacctgcgcctgctgtcc
aaccgcaacgatgacgcagcgttcgagcgcgcggtcaacacgccgacgcgtggcatcggc
gaccgcacgctggacgaagtgcgccgcgaggcgcgcgcgcagggtatttcgctgtgggaa
gcgaccatgctggtcacccagggcagcgcgctggccgcacgtgcgcgcaatgcgctggcc
ggcttcctggtgttggtcaacgagctgcaggcgcagaccctgcacatgaccctggccgag
cgcgtggaccacgtgctggcccgctcgcagctgcgcgagcactggagcaaggaaagccgc
aacgcgctggactccgaatcgcgcactgacaacctcgacgagctggtctcggtggcctcg
cgcttcgtgcgccgcgccgacgacatcgaggaagtgggcgaggacatggacgagctggtc
gcgttcctggcctatgccgcgctggaggccggtgagggccaggcgcaggcgggcgaagag
ggcgtgcagctgatgaccctgcactcggccaagggcctggagttcccgctggtgttcctg
gccggcctggaagaaggcctattccccagcgcacgctcgctggaggaaagcgggcggctg
gaagaagagcgccgcctggcctacgtcggcatcacccgcgcgcgccagaaactggtgctg
agctacgccgaatcgcgccgcatccatggccaggacaactacagcctgccgtcgcgcttc
ctgcgcgagatcccgcgcgagctgctgcacgaagtccgccccaaggtgcaggtctcgcgg
ccggcctcgatgggtgccagccgggtgatgggccatgcctcgatcgaggcaccgccgatc
aagctcggcgcgctggttacccatcccaagttcggcgaaggcatggtgaccgactacgaa
ggcaacggcgcccatgcccgcgtgcaggtcgagttcgccggcgccggcagcaagtggctg
gtgatggcgtatgccaacctgacggtgatctga
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