Stenotrophomonas maltophilia JV3: BurJV3_4061
Help
Entry
BurJV3_4061 CDS
T01596
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
buj
Stenotrophomonas maltophilia JV3
Pathway
buj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
buj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BurJV3_4061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buj03400
]
BurJV3_4061
Enzymes [BR:
buj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BurJV3_4061
DNA repair and recombination proteins [BR:
buj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BurJV3_4061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
NNH6
Motif
Other DBs
NCBI-ProteinID:
AEM53373
LinkDB
All DBs
Position
complement(4515125..4518472)
Genome browser
AA seq
1115 aa
AA seq
DB search
MMSDPGSDFRLYHSNSLDVLAALLARNMRAPVPGQPLLAPEVVLIPQVAMRRWLQATLAA
EYGVAANLEFLTPGEFVARALNANVPGERDDLDAAGLHWKLYQALRDPALLAQPPMRALQ
SYLAGGDALKPWALAGELASVFEKYQAWRRDWLLRWEAGADPADPQAILWRTIAGGHDYR
ARRIQAYLDRFEGAGQPLPQGLPPRMSAFATLNISPDVLRVMATQARVGELHFYMPTPVQ
SYWGDLQTLAERLRSGAPDPFGEAAGENRLLEAWGAAGRDFMAVLGSYEVVHPAGEIAAY
SDPEEDTRPTLDEGGLSDSLLHRLQRDLFHRRALPSGELRNGLRSDDPSLQVHACHTRLR
ELQVLHDQLRSLLQDPRFDPPLQAREIAVLAPDIDPYVPYLEAVFGGRGGEEEHIPYALA
DSSPLAGEPLADVFVHLLGLPVSRFGLNEVLDLLASAPLAEAAGLEAVDFDRLHGWLQQA
GARWGLDAKHRNQHQAPADDAYTWQFALDRLVLGHATGSEADLAGVAPWIELEGGALEAL
DRLLRLLRVLAIYQRRLGELLTPAQWRQRLLSLLDALLPTAPSSPNSQRALERLRKLLNQ
FADDAAKAGFEDGVPPEVVRSHFAGALGEADTRAPLLTGGISFGRMVPMRLLPFRVICVL
GLNDGDFPRRDPAAGLNQLTAELDTPRRRPGDRSTREDDRFLFLQLFAAAQEVFYLSYLG
ADPRDGSVREPSVLVSELIDAAAAYHLDPPAAVRDFTVRHALQPFSPAAFGDGDPRRFSY
RRQWHPAAGRLTGERGGLQPWFDAPLPPPLDDAVEDDVALDTLRRFLCDPAGQFLAQSLG
LRLADDVEEVDDLEPLVLSSRGPEKRSVQAAVVRATLSGDTEPLYPRLRARGLLPSGPLG
ERQFEVEQLKTRPYASALLGWMQGEPLESRRYEVEIDGVRLHGRVADRHPDGLVRLRAGT
LNGNAVIRQGLDWLLANAAGDALPLVQFHDGGDAGPGPHVLPALSVPAARAALRALLQLR
QRGLREPLRFAPYTGWVLYNAPAEKQRSEGWKQWHGSDRSWGESSSDAWQLLLRGADPFA
TDASYADLLRNSQVVFSAVREGRTLGADARQEGSA
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgacccgggcagcgatttccgcctctaccattccaactccctggacgtgctg
gccgcgctgctggcgcgcaacatgcgtgcgccggttccgggccagccgctgttggcgccg
gaggtggtgctgatcccgcaggtggcgatgcggcgttggttgcaagcgacactcgctgcc
gaatatggcgtggctgccaatcttgagttcctgaccccgggcgagttcgttgcccgtgcg
ctcaacgccaatgtgccgggcgaacgcgacgacctggacgcggccggcctgcactggaag
ctgtaccaggcactgcgcgacccggcgctgctggcgcagccaccaatgcgcgcgctgcag
tcctatcttgccggtggcgacgcgctgaagccgtgggcgctggccggtgaactggcctcg
gtgttcgagaagtaccaggcctggcgccgcgactggctgctgcgctgggaggccggcgcc
gacccggccgacccgcaggcgatcctctggcgcaccatcgccggtggccacgactaccgc
gcgcgccgcatccaggcctacctggaccgcttcgagggcgccggccagcctttgccacag
ggcttgccaccgcgcatgtccgcgttcgcgacgctcaacatctcgcccgacgtgctgcgg
gtgatggccacccaggcgcgggtgggcgagctgcacttctatatgcctacccccgtgcag
tcgtactggggtgacctgcagacgctggccgagcgcctgcgcagcggcgcgcccgatccc
ttcggtgaagcggccggtgagaaccgcctgctggaagcctggggcgcggccggccgcgac
ttcatggcggtgctgggcagctacgaggtggtgcacccggccggcgagattgcggcctac
tccgatccggaggaggacacccggccgaccctggacgaaggtggcctgtccgacagcctg
ctgcatcgcctgcagcgcgatctgttccaccgccgcgcactgccctcgggcgagctgcgc
aacgggctgcgcagcgacgaccccagcctgcaggtgcatgcctgtcatacccgcctgcgc
gagctgcaggtgctgcacgaccagctgcgcagcctgctgcaggacccgcgcttcgatccg
ccgctgcaggcgcgcgagatcgcggtgctggcgccggacatcgatccctatgtgccgtac
ctggaagcggtgttcggtggccgtggcggcgaggaggagcacattccgtatgcgctggcc
gacagcagtccactggcgggcgagccgttggccgatgtgttcgtacacctgctgggcctg
ccggtctcgcgtttcggcctgaacgaagtgctggacctgctggccagcgcgccactggcc
gaggcggccggtctggaagcggtggacttcgaccgcctgcatggctggctgcagcaggcc
ggtgcacgctggggcctggatgcgaagcaccgcaaccagcaccaggcaccggccgacgac
gcctacacctggcagttcgcgctggatcgcctggtgctcggtcacgcgaccggcagcgag
gccgacctggccggtgttgcaccgtggatcgagctggagggcggcgcattggaagcgctc
gaccggctgctgcgcctgttgcgcgtgttggcgatctaccagcgccgcctcggcgagctg
ctgacgccggcgcagtggcggcagcgcctgctgtcgctgctggacgcgctgctgccgacc
gcgcccagctcgcccaacagccagcgcgcgctggagcgcctgcgcaagctgctcaaccag
ttcgccgacgatgccgccaaggccggtttcgaagacggtgtgccaccggaggtggtgcgt
tcgcacttcgccggcgcgctgggcgaggccgatacgcgcgcgccgctgctgaccggtggc
atcagcttcggccgcatggtgccgatgcgcctgctgccgttccgggtgatctgcgtgctg
ggtctcaatgatggcgatttcccgcgccgtgacccggcggccggtctcaaccagctcacc
gccgagctggacacgccgcgccgccgacccggcgaccgctccacccgcgaagacgatcgt
ttcctgttcctgcagctgttcgccgccgcgcaggaggtgttctacctcagctacctcggt
gccgatccgcgcgatggcagcgtgcgcgagccgtcggtgctggtcagtgaactgatcgat
gccgccgccgcgtatcacctcgatccgcctgcggcggtccgcgacttcaccgtgcgccac
gcactgcagccgttctcgccagccgcgttcggtgatggcgatccacgccgcttcagctat
cgccgccaatggcatccagccgctggtcgtctcaccggcgagcgtgggggcctgcagccg
tggttcgatgcaccgttgccaccgccgctcgacgatgcggtggaagacgacgtcgcactc
gataccctgcgccgcttcctgtgcgacccggccgggcagttcctggcacagtcgctgggc
ctgcgcctggccgacgatgtcgaggaggtcgatgacctggagccgctggtgctgtcctcg
cgcggcccggagaagcgcagcgtgcaggcggcggtggtgcgcgccacgctcagtggcgat
accgagccgttgtacccgcgcctgcgcgcacgcggcctgctgccctccggcccattgggc
gagcgccagttcgaggtggagcagttgaagacccgcccctatgccagcgcattgctgggc
tggatgcagggcgaaccgctggaaagccgccgctatgaggtggagatcgatggcgtgcgc
ctgcatggccgggtggccgatcgacaccccgacgggctggtgcgcctgcgcgccggtacc
ctcaatggcaatgcggtgatccgccagggcctggactggctgctggccaacgcagcaggc
gatgcgttgccccttgtgcagttccacgatggcggcgacgccggtcccggaccgcatgtg
ttgccggcgttgagcgttcctgctgcacgcgccgcgctgcgcgcactgctgcagctgcgc
cagcgtggcctgcgtgaaccgctgcgcttcgccccgtacaccggctgggtgctgtacaac
gcgccagccgaaaaacagcgcagcgaaggctggaagcagtggcacggcagcgaccgcagc
tggggtgaatccagcagcgacgcctggcagctgctgctgcgcggtgccgatccgttcgcc
accgacgccagctatgccgacctgctgcgcaacagccaggtggtcttcagcgcggtgcgc
gaaggccgcacccttggcgccgatgcacgtcaggagggcagcgcatga
DBGET
integrated database retrieval system
