Burkholderia sp. KJ006: MYA_0109
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Entry
MYA_0109 CDS
T02110
Name
(GenBank) Helicase PriA essential for oriC/DnaA-independent DNA replication
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
buk
Burkholderia sp. KJ006
Pathway
buk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
buk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MYA_0109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buk03400
]
MYA_0109
Enzymes [BR:
buk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MYA_0109
DNA repair and recombination proteins [BR:
buk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MYA_0109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
PriA_CRR
AAA_16
AAA_19
ADDB_N
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
AFJ84479
UniProt:
I2DIK3
LinkDB
All DBs
Position
1:119421..121682
Genome browser
AA seq
753 aa
AA seq
DB search
MDGAYLRVALDHPLATLFDYRCDVQPVPGPGTLVQVPFGKRQAVGLVCEVTTHTDVPPSR
LRAIDAVCTELPPLGSDWLALVAFAADYYQRGRGEVALPALPQALRDAQRWGRLLAPELR
YRLTDAGRAALPDALPARGAALRRLAQALADADSLTLPDARAMHPKAAATLDDWAARGWV
AVDEIGWGDAPVPKAVDNLSTSSGRSVPPALTDQQAEALDAIRAAQGFAPFLLHGVTGSG
KTEVYLHALAALLDARPDAQALVLVPEINLTPQFEAAFRARFAGTLADDAIVTLHSGLAE
GERARNWLAAHTGRARIVLGTRLAVLASLPMLALIVVDEEHEPAYKQQEGLRYSARDLAV
WRAKHLGIPVVLGSATPSLESWWQAEQGRYTRLTLSRRAVADATLPTVRLIDLEEERRRG
RASMGGLSGPLVAALKARLERGEQSLVFLNRRGYAPQLACDACGWVAGCPRCSAYVVLHK
PEHALRCHHCGWEARIPRSCPECGNVDIAPLGRGTQRIEEALAEAVPGARVLRIDADSTR
RKGSAQALFSNVHAGEVDILVGTQMIAKGHDFQRVSLVGVLNADTALFSHDFRASERLFA
QLMQVSGRAGRAGLPGEVLVQTRYPRHALYHALGRHDYVGFANSTLGERRDAHLPPFVYQ
ALLRAEGRTLDAALGFLLQAAAALPGLPGAERVTVYDAVPMTIVKVANVHRAQLLLESAS
RSALQHALRAWQPQLRALKGVLRWSIEVDPLDI
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgcctatctgcgggtcgcgctcgaccatccgctggccacgctgttcgactat
cgttgcgacgtgcagccggtgccggggccgggcacgctggtccaggtgccgttcggcaag
cggcaggccgtcggcctcgtgtgcgaagtgacgactcacacggatgtgccgccctcccgc
ttgcgcgcgatcgatgcggtctgtaccgagcttccgccgctcggatcggactggctggcg
ctcgttgcattcgcggccgactactatcagcgcgggcgcggcgaagtcgcgttgccggcg
ttgccgcaggcgctgcgcgacgcgcagcgctggggccggctgctggcgccggagctgcgc
tatcggctgaccgacgccggccgcgcggcgcttcccgatgcgctgcccgcacgaggcgcc
gcgctgcggcggctcgcccaggcactcgcggacgccgattcgctgacgctgcccgatgcg
cgcgcgatgcacccgaaggccgccgcgacgctcgacgactgggcggcgcggggctgggtg
gccgtcgacgaaatcggctggggcgatgcgcctgtgcccaaagctgtggataacctgtcg
acaagcagtggaagatctgtgccgccggcgctgaccgaccagcaggccgaggcgctcgac
gcgattcgcgcggcacagggcttcgcgccgttcctgctgcacggcgtgaccggcagcggc
aagaccgaggtctatctgcacgcgctggccgcgttgctcgacgcgcggccggacgcgcag
gcgctcgtgctggtgcccgaaatcaacctgacgccgcagttcgaggccgcgtttcgcgcg
cgcttcgcgggcacgctcgccgacgacgcgatcgtcacgctgcacagcgggctcgccgaa
ggcgaacgcgcgcgcaactggctcgccgcacataccgggcgcgcgcgcatcgtgctcggc
acgcggctggcggtgctcgcgtcgttgccgatgctcgccttgatcgtcgtcgacgaagaa
cacgagcccgcgtacaagcagcaggaaggcctgcgctattcggcgcgcgatctggccgta
tggcgtgcgaagcatctcggcattccggtcgtgctcggctcggcgacgccgtcgctcgag
agctggtggcaggccgagcagggccgctacacgcggctcacgctgtcgcgccgcgcggtg
gccgatgcgacgctgccgaccgtgcgcctgatcgatctcgaagaggagcggcggcgcggg
cgcgcgtcgatgggcggactctccgggccgctcgtcgcggcgctgaaggcgcgcctcgaa
cgcggcgaacagagcctcgtgttcctgaaccggcgcggctacgcgccgcaactcgcgtgt
gacgcatgcggctgggtcgccggctgcccgcgctgcagcgcctacgtcgtgctgcacaag
cccgagcatgcgctgcgctgccatcactgcggctgggaagcgcgcattccgcgctcgtgt
ccggaatgcggaaacgtcgacatcgcaccgctcggccgcggcacccagcgcatcgaggag
gcgctcgccgaggccgtgccgggcgcgcgcgtgctgcgcatcgacgcggacagcacgcgc
cgcaagggcagcgcgcaggcgctgttctccaacgtgcatgcgggcgaggtggacatcctg
gtcggcacgcagatgatcgcgaaggggcacgacttccagcgcgtctcgctcgtcggcgtg
ctgaatgccgacaccgcgctgttctcgcacgatttccgcgcgagcgagcggctgttcgcg
caactgatgcaggtgagcggccgcgcgggccgcgccgggctgcccggcgaggtgctcgtg
cagacgcgctatccgcgtcacgcgctgtatcacgcgctcggccggcacgattacgtcggc
ttcgccaattcgacgctcggcgagcggcgcgacgcgcacctgccgccgttcgtctaccag
gcgctgttgcgcgccgaagggcgcacgctcgacgcggcgctcgggttcctgctgcaggcg
gccgccgcgctgccggggctgccgggcgccgagcgcgtgaccgtctacgacgccgtgccg
atgacgatcgtgaaggtcgcgaacgtccatcgcgcgcagctgctgctcgagagcgcgtcg
cgctcggcgctgcagcatgcgctgcgcgcatggcagccgcagctgcgcgcgttgaagggc
gtgctgcggtggagcatcgaggtcgatccgctcgacatctga
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