Burkholderia sp. KJ006: MYA_0442
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Entry
MYA_0442 CDS
T02110
Name
(GenBank) Uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
buk
Burkholderia sp. KJ006
Pathway
buk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
buk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MYA_0442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buk03400
]
MYA_0442
Enzymes [BR:
buk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MYA_0442
DNA repair and recombination proteins [BR:
buk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MYA_0442
Prokaryotic type
MYA_0442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFJ84810
UniProt:
I2DJI4
LinkDB
All DBs
Position
1:complement(475590..476489)
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AA seq
299 aa
AA seq
DB search
MATRKTLRTPQQASLFDDPAPEPAQHDVPAAAPARARAAGKKAAEAAPARAAQPQAGAAD
VPHLAAQFDALPAVWRDVLKPFTDSDAYAPLCRFVDDERAAGKTVYPTDVFRALRLTSPD
DVKVVILGQDPYHGDDRGTPQAHGLAFSVPPAVRTPPSLRNIFKEIAANFGHDTPRHGCL
DTWARQGVLLLNTVLTVERGAAASHAKRGWEQCTDTLIRELAGRHRGLVFMLWGAHAQAK
RALFDANAHCVLEAPHPSPLSAHRGFLGCRHFALANEYLVEAGREPIDWRLPEIAETLA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccgcaagactctccgtacgccgcaacaggcgtcgctgttcgacgatcccgcg
ccggaaccggcgcagcacgatgttcccgccgccgcacccgcgcgtgcgcgcgcggccggc
aagaaggccgcggaagcggctccggcgcgcgccgcgcagccgcaggccggcgccgccgac
gtcccgcacctcgccgcccaattcgacgcgctgccggccgtctggcgcgacgtgctgaag
ccgttcaccgacagcgacgcgtacgcgccgttgtgtcgcttcgtcgacgacgagcgcgcc
gccggcaagacggtctacccgaccgacgtgttccgcgcgctgcgcctgacgagcccggac
gacgtgaaggtcgtgatcctcggccaggacccgtaccacggcgacgaccgcggcacgccg
caggcccatggcctcgcgttctcggtgccgccggccgtgcgcacgccgccgtcgctgcgc
aacatcttcaaggaaatcgcggcgaacttcggtcacgacacgccgcgccacggctgcctc
gacacgtgggcgcgccagggcgtgctgctgctcaacaccgtgctgacggtcgagcgcggc
gccgccgcgagccacgcgaagcgcggctgggagcaatgcacggacacgctgatccgcgag
ctggccggccgtcatcgcggcctcgtgttcatgctgtggggcgcgcatgcgcaggcgaag
cgcgcgctgttcgatgcgaacgcccattgcgtgctcgaggcgccgcatccgtcgccgctg
tccgcgcaccgcggcttcctcggctgccgtcacttcgcgctcgcgaacgagtatctggtc
gaagcgggccgcgaaccgatcgactggcggctgccggagatcgccgaaacgctcgcctga
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