Burkholderia sp. KJ006: MYA_0582
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Entry
MYA_0582 CDS
T02110
Name
(GenBank) Outer membrane autotransporter barrel
Organism
buk
Burkholderia sp. KJ006
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AC_1
ESPR
Hyphal_reg_CWP
Motif
Other DBs
NCBI-ProteinID:
AFJ84949
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All DBs
Position
1:complement(626940..632177)
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AA seq
1745 aa
AA seq
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MNHSFRSIWSEAAGCWVAVAETARARGKRSGSTSGTNRRASRDAIRLAPLRAAMAGAAFA
ALSAGAAHASTCGNGSAVASGGSCTVGSFSPTVNDNLAGATTVTGGDTVAATGAWTSQNG
GDAGYTRVPLGTTTIVTGNPDQPLVSLGGKTQSVSTPDSITGTHASVATYNSSAFAASTL
GATYVPLYHDVDGNQYLNTRIGTVERSGGTLNVSLGNAANAPDAAGNAITIAAKQTDLAF
ADGTGTASSVVNWNSRNQVLFTTGDYVEAGGAVGNLQLDVPAYAGTFTAFDGSRWRVDDA
ASLAAYNDFLVRSVRSGALGSQAAYDSAFSQAVTFSRQTFQYANDVSAGDKNTLPIDHLA
ALHGTGANATLHIGRDGQIDFRGTSAIESSSAVLAENGAQFVNDGSLSGDFTLVRLLTGA
SGVNNGVISSGYAAGENFDTAGAAPPENFGFHAYTEGNGVYANGTGTTFVNNGVMNVAAW
TLDGNRPTLLSYAIAATDGATASNAGTLNVGVNATTLDSQVIGGLADGGAFTNEAGGTIY
VGRAAQYRPGAAAADVALSAHGYGILLGASGTAANLGSIVIGSQTQNGAAMASIGSSSGT
LRNAGTIVVNGAAPGTPLANVGMLAADTAATVTNTGTITLNGVNGIGIMVVGTGSTATAA
TSTGTIDVAGGLDAASDTRNYGVWAEGPRAKATLDGALDLTGNGAIGAHARAGAAIDVGA
NAVPRFTSGTNQIGFYVYGAGSTINVAAQRLSVDTDDSTLFRIAAGAAYTGASAAGTLTT
DVNGERARGVHATGAGTTLSTGSATYNVRGANGIAVAVEGGAHGTIDAGATINLNAAGAT
AGVVDGQAHDLAGANAGAPVATVLGNDAAVMSSSAGVTGFVARNLGTLENRNAVLLTGVG
STGVAIGALGTVDNMSTIRVSDGTGALVQGASAVLNNAGTIGADDGVAGVHLTGAGASVV
LSGAGTIVANGSAHGVLIDSSVANGALAAGATSIAVGGGGAGIDNLGTNTTIVLSGTQIG
TTGNGADGISSTGAGTRIATDAASVVRTAGENARAIVVAGADATLAADGTTVSTTGAGAH
GLVVGGGATALLSGAKIAAAGAAADGVVAQNGGRIGDTGSTLTSAAGNGATVDGGGVLAL
TGTTLHGATAGLLSVDSRASGATSSVLVDGGSVASVAGPAFAARGGAVDIAVRNGTVVTA
GNGTLLDLANGSVARFDASAVTLAGDIVSDASSTGTVSLTNGTTLTGKIDPVALNVDATS
AWRITGSSVLSSLNNAGLVAFAAPSGAPTAAGSYKTLTTGGYVGNGGTIALNTYLGADAS
PTDRLIVNGGAASGTTALKIANTAGSGAQTTGDGIPVVVTANGGTTAASAFHLAGPVQAG
AYEYRLYRGGQLDANGWYLRSQLDPSNQVIAVGPLTAGGGAGTLAYRPGVAGFTMTPLLN
ADYGFSTLGKLHERVGDVYNVDKQAPGNRDGVWGRIGGQSFDANAGRFAADERTFFAQFG
KDWTLGQAPDGGSTHAGVTASIGVSNASFSDPARVDAPGLSTSTGSVEMHAQSAGGYWTR
YLADGTYFDSVGQVTHYGNRYRDSYGNDASQNGFGIALSQEAGKPFGIGATPIAIEPQAQ
LMYQYLKLNGFNDSVSAVSGTTSHALRGRLGVRMFRPNLGASALGAATPYFTADVLHDFL
SPGQTVVGGTPFATHLGRTWYELGLGVTAAFGKSGTLYANVKYARNIGGDYRRGVTGQAG
YRYSW
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcactcatttcgatcgatatggagcgaagccgccggctgctgggtcgcggttgcg
gagacagcccgggcacgcggcaagcgctcgggcagcacatcgggcacgaaccgtcgcgcg
agccgcgacgcgatccggctggcgccgctgcgcgccgcgatggccggcgccgcgttcgcc
gcgctgtcggccggcgccgcacatgcatcgacctgcggcaacgggtcggcggtcgcgagc
ggcggcagctgcaccgtcggcagcttcagcccgaccgtgaacgacaacctggccggggcg
acgaccgtcacgggcggcgataccgtcgccgcgaccggcgcatggaccagccagaacggc
ggcgacgccggctacacgcgcgtcccgctcggcacgaccacgatcgtgacgggcaatccc
gaccagccgctggtctcgctcggcggcaagacgcagagcgtcagcacgcccgattcgatc
accggcacccacgcatcggttgcgacctacaattcgtccgcgttcgccgcatcgacgctc
ggcgcgacctacgtgcccctctatcacgacgttgacggcaaccagtacctgaacacgcgg
atcggcaccgtcgagcgctcgggcggcacgctgaacgtgtcgctcggcaacgcggcgaac
gcgcccgacgcggccggcaacgcgatcacgatcgcggcgaagcagacggacctcgccttc
gcggacggcaccggcaccgcgtcaagcgtcgtcaactggaactcgcgcaaccaggtgctg
ttcacgaccggcgactacgtcgaggccggcggcgcggtgggcaacctgcagctcgacgtg
ccggcctacgcgggcaccttcaccgcgttcgacggcagccgctggcgcgtcgacgacgcc
gcgtcgctcgccgcatacaacgactttctcgtacgctcggtccgcagcggcgcgctcggc
tcgcaagccgcgtacgacagcgcgttcagccaggccgtcacgttctcgcggcagaccttc
cagtacgcgaacgacgtgtcggccggcgacaagaacacgttgccgatcgaccatctggcc
gcgctgcacggcaccggcgcgaacgcgacgctgcatatcggccgagacggccagatcgac
ttccgcggcaccagcgcgatcgaatcgagctcggcggtgctcgcggaaaacggcgcgcag
ttcgtcaacgacggcagcctgtcgggcgacttcacgctcgtgcggctgctcaccggtgcg
agcggcgtcaacaacggcgtgatctcgtccggctacgcggccggcgagaacttcgacacc
gccggcgccgcgccgcccgagaacttcggcttccacgcctacaccgagggcaacggcgtg
tacgcgaacggcacgggcaccacgttcgtgaacaacggcgtgatgaacgtcgccgcatgg
acgctcgacggcaaccggccgaccctgctcagctacgcgatcgcggcgaccgacggcgca
accgcgtcgaacgccggcacgctgaacgtcggcgtcaacgcaaccacgctcgacagccag
gtgatcggcggcctcgcggacggcggcgccttcaccaacgaggccggcggcacgatctac
gtcggacgcgcggcgcagtaccggccgggcgcggcggcggccgacgtcgcactgtccgcg
cacggctacggcatcctgctcggcgcgtcgggcacggccgcgaacctcggctcgatcgtg
atcggctcgcaaacgcagaacggcgccgcgatggcgagcatcggctcgtcgtccggcacg
ctgcgcaacgccggcacgatcgtcgtgaacggtgcggcgcccggcacgccgctcgcgaac
gtcgggatgctggcggccgacacggccgcgaccgtgaccaacacgggcacgatcacgctg
aacggcgtgaacggcatcggcatcatggtggtcggcaccggctcgaccgccacggccgcg
acgtcgaccggcacgatcgacgtcgccggcgggctggacgcggcgtcggacacacgcaat
tacggcgtctgggccgaaggcccgcgcgcgaaggccacgctcgacggcgcgctcgacctg
accggcaatggcgcgatcggcgcccacgcgcgcgcgggcgccgcgatcgacgtcggcgcg
aacgccgtgccgcgcttcacgtccggtacgaaccagatcggcttctacgtgtacggcgcc
ggctcgacgatcaacgtggccgcgcagcggctgagcgtcgataccgacgactcgacgctg
ttccgcatcgcagccggcgcggcctacacgggcgcgtcggccgccggcacgctgacgacc
gacgtgaacggcgagcgcgcgcgcggcgtgcacgcgaccggcgccggcacgacgctgtcg
accggctccgcgacctacaacgtgcgcggcgcgaacggcatcgcggtggcggtcgagggc
ggcgcacacggcacgatcgacgccggcgcgacgatcaacctgaacgcggccggcgccacg
gcgggcgtggtcgacggccaggcccacgacctggccggcgcgaacgccggcgcgccggtc
gcgacggtgctcggcaacgacgcggccgtcatgtcgtcgagcgccggcgtgaccgggttc
gtcgcgcgcaacctcggcacgctggagaaccgcaacgcggtgctgctgaccggcgtcggc
tcgaccggcgtcgcgatcggcgcgctcggcacggtcgacaacatgtcgacgatccgcgtg
tcggacggcaccggcgcgctcgtgcaaggcgcgtcggccgtgctgaacaacgcgggcacg
atcggcgccgacgacggcgtcgccggcgtgcatctgaccggcgcgggcgcgtcggtcgtg
ctgtcgggcgcgggcaccatcgtcgcgaacgggagcgcgcacggcgtgctgatcgactcg
agcgtcgcgaacggcgcgctcgcggccggcgcgacgtcgatcgcggtgggcggcggcggc
gccggcatcgacaacctcggtaccaacacgacgatcgtgctgtcgggcacgcagatcggc
acgaccggcaacggcgccgacggcatctcgtcgacgggcgcgggcacgcgcatcgcgacc
gatgcggcgagcgtcgtgcgcaccgcgggcgaaaacgcgcgcgccatcgtcgtggccggc
gccgatgcgacgctggccgccgacggcaccaccgtctcgaccaccggcgccggcgcgcat
gggctggtcgtcggcggcggcgcgaccgcgctgctgtcgggcgcgaagatcgcggcggcg
ggcgcggcagccgacggcgtcgtcgcgcaaaacggcggccggatcggcgacaccggctcg
acgctcacgagcgcggccggcaacggcgcgaccgtcgacggcggcggcgtgctcgcgctg
accggcacgacgctgcacggcgcgacggccggcttgctgagcgtcgactcgcgcgcgagc
ggcgcgacgagttcggtgctggtcgacggcggtagcgtcgcgtcggtcgccggcccggcg
ttcgccgcgcgcggcggcgcggtcgacatcgcggtacgcaacggcaccgtcgtgacggcc
ggcaacggcacgctgctcgacctcgcgaacggcagcgtcgcgcgcttcgacgcttcggcc
gtgacgctggccggcgacatcgtgtcggacgcgtcgagcaccgggaccgtgtcgctgacg
aacggcacgacgctgacgggcaagatcgatccggtcgcgctgaacgtcgacgcgacgagc
gcatggcggatcaccggcagctcggtgctgagcagcctgaacaacgcgggcctggtcgca
ttcgccgcgccgtcgggcgcgccgacggcggccggcagctacaagacgctgaccaccggc
ggctacgtcggcaacggcggcacgatcgcgctgaacacctatctcggcgccgacgcgtcg
ccgaccgaccggctgatcgtgaacggcggcgccgcaagcggcacgacggcgctgaagatc
gcgaacaccgccggcagcggcgcgcagacgaccggcgacggcattccggtggtggtcacg
gcgaacggcggcacgacggccgcgtccgcgttccatctcgccggcccggtccaggccggc
gcatacgaataccggctctatcgcggcggccagctcgacgcgaacggctggtatctgcgc
tcgcagctcgatccgtccaaccaggtcatcgcggtcggcccgctgaccgccggcggcggc
gccggcacgctcgcgtaccgtccgggcgtcgcgggcttcacgatgacgccgctcctgaac
gccgactacggcttctcgacgctcggcaagctgcacgagcgcgtcggcgacgtgtacaac
gtcgacaagcaggcgcccggcaatcgcgacggcgtgtggggccgcatcggcggacagagc
ttcgatgcgaacgcgggccgcttcgcggccgacgagcgcaccttcttcgcgcagttcggc
aaggactggacgctcggccaggcgccggacggcggcagcacgcatgcgggcgtgacggcg
agcatcggcgtgtcgaatgcgagcttcagcgatccggcgcgcgtcgatgcgcccggcctg
tcgacgtcgaccggctcggtcgagatgcacgcgcagagcgccggcggctactggacgcgc
tatctggccgacggcacctacttcgacagcgtcgggcaggtcacgcactacggcaaccgc
tatcgcgacagctacggcaacgacgcatcgcagaacggcttcggcatcgcgctgtcgcag
gaagccggcaagccgttcggcatcggcgccacgccgatcgcgatcgaaccgcaggcgcag
ctgatgtatcagtacctgaagctgaacgggttcaacgacagcgtgtcggcggtgtcgggc
acgacgagccatgcgctgcgtggacgcctcggcgtacggatgttccggccgaacctcggg
gcgagcgcgttgggcgcggcgacgccgtatttcacggccgacgtgctgcacgacttcctg
tcgccgggccaaaccgtcgtcggcggcacgccgttcgcgacgcatctgggccgcacgtgg
tacgagctcggcctcggcgtgaccgcggccttcggcaagtcgggcacgctgtacgcgaac
gtcaaatacgcgcgcaacatcggcggcgactaccggcgcggcgtcaccggccaggccggc
taccgctacagctggtaa
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