Burkholderia sp. KJ006: MYA_0896
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Entry
MYA_0896 CDS
T02110
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
buk
Burkholderia sp. KJ006
Pathway
buk03030
DNA replication
buk03430
Mismatch repair
buk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
buk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYA_0896
03430 Mismatch repair
MYA_0896
03440 Homologous recombination
MYA_0896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
buk03032
]
MYA_0896
03400 DNA repair and recombination proteins [BR:
buk03400
]
MYA_0896
Enzymes [BR:
buk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MYA_0896
DNA replication proteins [BR:
buk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MYA_0896
DNA repair and recombination proteins [BR:
buk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MYA_0896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AFJ85263
LinkDB
All DBs
Position
1:948374..949501
Genome browser
AA seq
375 aa
AA seq
DB search
MSDLYPSDPASEQPLVFVDLETTGGSPAEHRITEIGVVEIGPGHMSTWTTLVNPGQPIPP
FIQQLTGISDDMVRDAPSFASLAPALFERLDGKLFVAHNASFDRGFLRAEFERAGLAFNP
DVLCTVKLSRALFPRESRHGLDALIERYGLVPAARHRALADADLIWQFWRQLHTLVPLER
LRDQIARTTRHFRLGGDLTEAWLDTAPAGCGAYALFGEGDEALYVGRSVRVRQRLRALLT
GERRSSKEMRIAQQVRRVEWRETGNELGAMLAEAQWIARLRPAYNRRPTAAAVRAGDAPW
PFDGAVAFEAHGERSLFHVIDAWRYLGVAESLDAAARLAADGTDGAFEPHTQRLLQTYLA
RGLQLIPLAAFAAAD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctttatccgtccgatcctgccagcgaacagccgctcgtcttcgtcgacctc
gaaaccactggtggatcgcccgccgaacatcgcattaccgaaatcggggtagtcgaaatc
ggtccgggccacatgtccacatggacgacgctggtcaatcccgggcagccgatcccgccg
ttcatccaacagctgaccggtatttcggacgacatggtgcgcgacgcgccgtcgtttgcg
tcgctcgcgccggcgctgttcgagcgtttggacggcaagctgttcgtcgcgcacaacgcg
agcttcgaccgtggttttctgcgcgcagaattcgagcgcgccggcctcgcattcaacccc
gacgtgctatgcacggtgaagctgtcgcgcgcgctgtttccgcgcgagtcgcggcatggc
ctcgatgcgctgatcgagcggtatgggctggtccccgccgcgcgccaccgcgcgctcgcg
gatgcggacctgatttggcagttctggcggcaattacacacgctcgtgccgctcgagcgc
ttgcgcgaccagatcgcacgtacgacgcgccacttccgtctgggcggcgacttgaccgaa
gcatggctcgataccgcgccggccggatgcggcgcctatgcgctgttcggcgagggcgac
gaagcgctgtacgtcggccgcagcgtgcgtgtccggcagcgcttgcgtgcgctgctgacc
ggcgagcggcgctcgtcgaaggaaatgcggatcgcgcagcaggtgcggcgcgtcgagtgg
cgggagaccggcaacgagctgggcgcgatgcttgccgaagcgcagtggatcgcgcgcctg
cgcccggcatacaaccggcgacccacggctgcggccgtacgtgccggtgatgcgccctgg
ccgttcgacggcgcggtcgcgttcgaggcgcacggcgagcgcagcctgtttcatgtgatc
gatgcgtggcgctacctcggcgtggccgagtcgctcgacgccgccgcgcggctcgcggcg
gacggcacggacggcgcgttcgagccccatacgcagcgtctgttgcagacctatctcgcg
cgcggcctccaattgatcccgctggcggcgttcgcggccgccgactga
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