Burkholderia sp. KJ006: MYA_2109
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Entry
MYA_2109 CDS
T02110
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
buk
Burkholderia sp. KJ006
Pathway
buk03030
DNA replication
buk03430
Mismatch repair
buk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
buk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYA_2109
03430 Mismatch repair
MYA_2109
03440 Homologous recombination
MYA_2109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
buk03032
]
MYA_2109
03400 DNA repair and recombination proteins [BR:
buk03400
]
MYA_2109
Enzymes [BR:
buk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MYA_2109
DNA replication proteins [BR:
buk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MYA_2109
DNA repair and recombination proteins [BR:
buk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MYA_2109
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
AFJ86469
LinkDB
All DBs
Position
1:complement(2289047..2292580)
Genome browser
AA seq
1177 aa
AA seq
DB search
MSDPRFVHLRVHSEFSIADGIVRLDDIVKAAAADGQGALALTDLGNAFGLVRFYQEARGK
GIKPIAGCDVWITNPDDRDKPSRLLLLVKDKTGYLNLCELLSKAWLTNQYRGRAELDASW
LDGELSQGLLALSGAQQGDIGLALAAGNEEAARRHAQRWAEVFPGGFYIELQRYGQPGAE
AYIQQAATLAASLQLPVVATHPMQFMTEDDFTAHEARVCISEGDMLANPRRQKRFTTAQY
FRTQDDMVALFADIPSAVANTVEIAKRCNLKLELGKPKLPLFPTPDGMSLDDYLVQLSKE
GLEKRLEQLYPDVAERDAQRDTYYKRLEFECGTITKMGFPGYFLIVADFINWAKNNGVPV
GPGRGSGAGSLVAYALGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYV
KEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGVAKLIPFKPGKHVTIADAMK
EEPQLQERYDNEDEVHQLLDLAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGDDAG
VVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPTKADWSLAQVPLDDPASFQ
LLKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVSLYRPGPMDLIPSFCARKHGREK
VDYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAKHRE
IFAEGAAKNGLTREKSDEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEFMAA
NMTLAMDDTDKVKILFDDCVSNNLVVLPPDINQSHYRFEPVAQADGTRSRTIRYGLGAVK
GSGQNAIEEILRAREEKPFADLFDFCERVDRRIVNRRTVEALIRAGAFDSLNPNRAQMLA
SVPLAMEAAEQAAANAMQAGLFDMGAESPHAHALVDEPAWDDKRRLQEEKGALGFYLSGH
LFDAYRDEVRRFVRQKVGDLKEGRDKLVAGIIASLRTQMTQRGKMLIALLDDGSGQCEIT
IFNEQFEANKALFKEDELLIVQGQARNDAFTGGIRFTADTVMDLERARSRYAQAVRLTMN
GNADAAVLRRVLEPHVSKDEPGAANVVDAPAPRGGGRDGGRRPQAPLPNGLAVQIHYSNA
RAQGEMRLGDAWRVKPSDALLAELRATFGGSVVEITY
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatccccgcttcgtccatctccgcgttcactccgaattctcgattgccgacggc
atcgtgcgtctcgacgacatcgtcaaggccgctgccgccgacggtcagggtgcgctcgcc
ctcaccgatctcggcaacgcgttcggcctcgtccgtttctaccaggaagcccgtggcaag
ggcatcaagccgattgccggctgcgacgtctggatcacgaatccggacgatcgcgacaaa
ccgtcgcgcctgctgctgctggtgaaggacaagaccggttatctgaatctgtgcgagctg
ctgtcgaaggcgtggctcacgaaccagtaccgcggccgggcggagctcgacgcgagctgg
ctcgacggcgagttgtcgcaagggctgctcgcgctgtcgggcgcgcagcaaggcgatatc
gggctcgcgctggcggccggtaacgaggaagccgcgcgccgtcacgcgcagcgctgggcc
gaggtgtttcccggcggcttctacatcgagttgcagcgttacggccagccgggcgccgag
gcctacatccagcaggccgcgacgctcgccgcgtcgctgcagctgccggtcgtcgcgacg
catccgatgcagttcatgaccgaggacgatttcaccgcgcacgaagcgcgcgtgtgtatc
tccgaaggcgacatgctcgcgaatccgcggcgccagaagcgcttcacgaccgctcagtac
ttccgcacgcaggacgacatggtcgcgctgttcgcggatattccgtcggcggtcgcgaac
acggtggaaatcgcgaagcgctgcaacctgaagctcgagctcggcaagccgaagctgccg
ctgttcccgacgccggacggcatgtcgctcgacgattacctggtccagctgtcgaaggag
gggctcgagaagcgcctcgagcagctgtacccggatgtcgccgagcgcgatgcgcagcgc
gacacctactacaagcggctcgaattcgagtgcgggaccatcacgaagatgggctttccc
ggctacttcctgatcgttgccgacttcatcaactgggcgaagaacaacggcgtgccggtc
ggtccgggccgcggctcgggcgccggctcgctggtcgcgtacgcgctcggcatcaccgat
ctggatccgctgcgctacaacctgctgttcgagcgattcctgaatccggaacgcgtgtcg
atgcccgacttcgacatcgacttctgtcagcacggccgcgatcgcgtgatccagtacgtg
aaggagaaatacggtgcggacgccgtgtcgcagatcgccacgttcggcacgatggccgcg
aaggcggccgtgcgcgacatcggccgcgtgctcgatctcggctacatgttcaccgacggc
gttgcgaagctgatcccgttcaagccgggcaagcacgtgacgatcgccgacgcgatgaag
gaagagccgcaactgcaggagcgctacgacaacgaggacgaggtacatcagctgctcgat
ctcgcgcagcgcgtcgagggcctcacgcgtaacgtcggcatgcacgcgggcggcgtgctg
atcgcgccgggcaagctgaccgatttctgtccgttgtacacgcagggcgacgacgccggc
gtcgtcagccagtacgacaaggacgacgtcgaagccgtcggcctcgtgaagttcgacttt
ctgggcctcacgacgctgacgatcctcgactgggccgagcgctacatccgtcgcctcgac
ccgaccaaggccgactggtcgctcgcgcaggtgccgctcgacgatccggcgtcgttccag
ctcctcaagaaggccaacacggtcgcggtgttccagctggaaagccgcggcatgcagggc
atgctgaaggacgcgcagcccgaccgcttcgaagacatcatcgcgctcgtgtcgttgtac
cgtccggggccgatggacctgatcccgagcttctgcgcccgcaagcacgggcgcgagaag
gtcgactatccggatccgcgcgtcgaacccgtcctgaaagagacctacgggatcatggtc
tatcaggagcaggtgatgcagatggcgcagatcatcggcggctactcgctcggcggcgcg
gacttgctgcgtcgcgcgatgggcaagaagaagcccgaggagatggccaagcaccgcgag
atcttcgccgaaggtgcggcgaagaacggcctcacgcgcgagaagtccgacgagatcttc
gacttgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggccgcgtacgcg
ctgctcgcctattacaccgcgtggctgaaggcgcaccatccggccgaattcatggcggcc
aacatgacgctcgcgatggacgacaccgacaaggtgaagatcctgttcgacgactgcgtc
tcgaacaacctcgtggtgctgccgcccgacatcaaccagtcgcattaccgcttcgagccg
gttgcgcaggccgacggcacgcgttcgcgcacgatccgctacggcctcggcgcggtgaag
ggcagcggccagaatgcgatcgaggaaatcctgcgcgcgcgcgaggagaagccgtttgcc
gatctgttcgacttctgcgagcgggtcgaccggcgcatcgtcaaccgtcgcacggtcgag
gcgctgatccgcgcgggcgcgttcgattcgctgaacccgaaccgcgcgcagatgctcgcg
tcggttccgcttgcaatggaggcggccgaacaggccgctgcgaacgcgatgcaggccggc
ctgttcgacatgggcgccgagtcgccgcacgcgcatgcgctcgtcgacgaaccggcgtgg
gacgacaagcgccggctgcaggaagagaagggcgcgctcggcttctacctgtccggccac
ctgttcgacgcgtatcgcgacgaagtgcgccggttcgtgcggcagaaggtgggtgatttg
aaggaaggccgcgacaagctcgtcgcgggcatcatcgcttcgctgcgcacgcagatgacg
cagcgcggcaagatgctgatcgcgttgctcgacgatgggtcggggcagtgcgaaatcacg
atcttcaacgagcagttcgaggcgaacaaggcgctgttcaaggaagacgagctgctgatc
gtgcaggggcaggcgcgtaacgacgcgttcaccggcggcatccgcttcacggccgacacg
gtgatggatctcgaacgcgcgcgcagccgctatgcgcaggcggtgcggctgacgatgaac
ggcaacgccgatgcggcggtgctgcgccgcgtactcgagccgcacgtgtcgaaggatgaa
ccgggcgccgccaacgtggtcgacgcccccgcgccgcgcggcggcgggcgcgacggcggc
cgtcgcccgcaggcgccgctgccgaacgggctcgcggtgcagattcactacagcaacgcg
cgcgcgcagggcgaaatgcgtctgggcgatgcgtggcgcgtgaagccgagcgacgcgttg
ctcgcggagctgcgcgcgacgttcggcggcagcgtcgtcgaaatcacgtactga
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integrated database retrieval system
