Burkholderia sp. KJ006: MYA_2112
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Entry
MYA_2112 CDS
T02110
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
buk
Burkholderia sp. KJ006
Pathway
buk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
buk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYA_2112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
buk03019
]
MYA_2112
Enzymes [BR:
buk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MYA_2112
Messenger RNA biogenesis [BR:
buk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MYA_2112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AFJ86472
UniProt:
I2DP96
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All DBs
Position
1:complement(2294892..2296373)
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AA seq
493 aa
AA seq
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MSDSVAKPADATFDQFGLAPDILKAIVEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTG
KTASFSLPIIQRLLPHASTSASPARHPVRALILTPTRELADQVAANVHAYAKHTALRSAV
VFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQMLVLDEADRMLDMGFLP
DLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVA
EGDKQAAVVQLLRGRGLKQVIVFCNSKIGASRLARNLERDGVVASAIHGDKSQIERMQAL
DAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSL
CSPNERKQLADIEKLIKRPLEVQTLALDKPARHRHDERGERNERGERSERGGRRDRDEHR
GASARRSGSAERGGHHRRHDAPVDDFFLKPYEPSTPAQQPEETTSVQQPEKKGPKRQVAA
LLGGFGMPRKPSA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattctgtcgccaagcctgccgacgcaaccttcgatcaattcggcctcgcgccc
gatatcctgaaagccatcgtcgagcagggctatacgacgccgacgccgatccaggcgcag
gccattccggtcgtgctcgccggccgcgacgtcatgggcgccgcgcaaacgggcaccggc
aagaccgcgagtttctcgctgccgatcatccagcggctgctgccgcacgccagcacgagc
gcgtcgccggcgcgccatccggtgcgcgcgctgatcctcacgccgacgcgcgagctcgcc
gaccaggtcgccgcgaacgtgcatgcgtacgcgaagcacacggcgctgcgcagcgcggtc
gtgttcggcggcgtcgacatgaatccgcagatggccgagctgcgccgcggcgtcgagatc
ctgatcgcgacgccgggccgcctgctcgatcacgttcagcaaaagacggcgaacctcggc
caggtccagatgctcgtgctcgacgaagccgaccggatgctcgacatgggcttcctgccc
gacctgcagcgcatcctgaacctgctgccgaaggagcgtcagacgctgctgttctccgcg
acgttctcgccggaaatcaagaagctcgcgtcgacctacctgcgcaacccgcagacgatc
gaagtcgcgcgcagcaactcgaccaacgcgaacgtcacgcagatcgtctacgacgtcgcc
gaaggcgacaagcaggcggccgtcgtgcagttgctgcgcgggcgcgggctcaagcaggtg
atcgtgttctgcaacagcaagatcggcgcgagccggctcgcgcgcaatctcgagcgcgac
ggcgtggtggcctcggcgatccacggcgacaagtcgcagatcgagcggatgcaggcgctc
gacgcgttcaagcgcggcgagatcgaggcgctggtcgcgaccgacgtggccgcgcgcggg
ctcgacatcgccgaactgccggccgtgatcaacttcgacctgccgttcaacgcggaagac
tacgtgcaccggatcggccgcacgggccgcgccggggcgacgggcgacgcgctgtcgctg
tgcagcccgaacgagcgcaagcagctcgccgatatcgagaagctgatcaagcgtccgctc
gaagtgcagacgctcgcactcgacaagccggcccgccatcgtcacgacgagcgcggtgag
cgcaatgagcgcggcgaacgtagcgagcgcggcggccgtcgcgaccgcgacgagcatcgc
ggtgcgtcggcgcgtcgttcaggcagcgccgagcgcggtggtcatcatcgccgccacgac
gcgccggtcgacgattttttcctgaagccgtacgaaccgtcgacgccggcgcagcaaccc
gaggagacgacgtccgtccagcagcccgagaagaaagggccgaagcggcaggtcgccgcg
ctgctcggcgggttcggaatgccgcgcaagccttccgcataa
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