Burkholderia sp. KJ006: MYA_2433
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Entry
MYA_2433 CDS
T02110
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
buk
Burkholderia sp. KJ006
Pathway
buk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
buk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYA_2433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
buk03019
]
MYA_2433
Enzymes [BR:
buk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MYA_2433
Messenger RNA biogenesis [BR:
buk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MYA_2433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
DegT_DnrJ_EryC1
Ric8
Cas3-like_C_2
Sacchrp_dh_NADP
CMS1
CARD_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AFJ86793
LinkDB
All DBs
Position
1:2632903..2634363
Genome browser
AA seq
486 aa
AA seq
DB search
MSFESLGLAEPLVKAVNELGYTSPTPIQQQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL
QRLHTFYTEHRGAKRAVRALILTPTRELAAQVEESVRAYSKYVKLRSTVMFGGVSINPQI
DALKRGVDIVVATPGRLLDHMQQKTIDLSDLDILVLDEADRMLDMGFIHDIKRVLAKLPP
RRQNLLFSATFSDEIKALADSLLDSPALIEVARRNTTAETVAQKIHPVDRDRKRELLTHL
IREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALAEFKNNTLQVL
VATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGATGEAVSLVCVDEKQLLRD
IERLIKREIPQEVIAGFEPDPNVKPEPIQQRRGQQPRGGGNGGGGGGGGGNRQPRAGGSG
QAGAKRDANAQPKAAKAAKPRAAGGASGNANGGGRPAGGGNGARPANGNAAHPNRNRSSR
SGQRGH
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgaatctctcggcctggccgaaccgctcgtcaaggcggtcaacgagctcggc
tacacgtcgccgaccccgatccagcagcaggcgatccccgccgtcctcggcggcggcgac
ctgctcgccggcgcacaaaccggcaccggcaagaccgccggcttcacgctgccgatcctg
cagcggctgcataccttctacaccgagcatcgcggcgcgaagcgtgcggtgcgcgcgctg
atcctcacgccgacgcgcgaactcgccgcccaggtcgaggaaagcgtgcgcgcgtacagc
aagtacgtgaagctgcgctcgaccgtgatgttcggcggcgtcagcatcaatccgcagatc
gacgcgctcaagcgcggcgtcgacatcgtcgtcgcgacgccgggccgtctgctcgaccac
atgcagcagaagacgatcgacctgtcggatctcgacatcctcgtgctcgacgaagcggac
cggatgctcgacatgggcttcatccacgacatcaagcgcgtgctcgcgaagctgccgccg
cggcgtcagaacctgctgttctcggcgaccttctccgacgagatcaaggcgctcgccgac
agcctgctcgattcgccggcgctgatcgaagtcgcacgccgcaacacgaccgcggaaacc
gtcgcgcagaagatccacccggtcgatcgcgatcgcaagcgcgagctgctcacgcatctg
atccgcgagcacaactggttccaggtgctcgtgttcacgcgcaccaagcacggcgcgaac
cggctcgccgagcagttgacgaaggacggcatcagcgcgatggcgatccacggcaacaag
agccagtcggcccgcacgcgcgcgctggccgagttcaagaacaacacgctgcaggtgctc
gtcgcgaccgacatcgccgcgcgcgggatcgacatcgaccagttgccgcacgtcgtcaac
ttcgacctgccgaacgtgccggaagactacgtgcaccgcatcggccgcacgggccgcgcg
ggcgcgaccggcgaagcggtgtcgctggtgtgcgtcgacgagaagcagttgctgcgcgac
atcgagcggctgatcaagcgcgagattccgcaggaagtgatcgcgggcttcgaacccgat
ccgaacgtcaagccggagccgatccagcagcgtcgcggccagcagccgcgcggcggcggc
aacggtggcggcggtggcggcggcggtgggaatcgtcagccgcgtgcgggcggctcaggc
caggccggcgcgaagcgcgacgccaacgcgcagccgaaggccgcgaaggcggccaagccg
cgcgcggccggcggtgcgagcggtaacgccaacggcggcggccgcccggccggcggcggc
aacggcgcacgtcccgccaacggcaatgccgcgcacccgaaccgcaaccgttcgtcgcgc
agcggccagcgcggtcactga
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