Burkholderia sp. KJ006: MYA_4532
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Entry
MYA_4532 CDS
T02110
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
buk
Burkholderia sp. KJ006
Pathway
buk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
buk00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MYA_4532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
buk03021
]
MYA_4532
Transcription machinery [BR:
buk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYA_4532
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Sigma70_ner
KORA
Motif
Other DBs
NCBI-ProteinID:
AFJ88886
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All DBs
Position
2:1757862..1759418
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AA seq
518 aa
AA seq
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MTLPRPTLRADTPLDPIIQLLARAGEQGYLTHADLVDALPPDTDSADALEVVRAALADIG
IDVLDEPAAPAPFVGTTPVDVDRDTLDESRALLGDLARGASASTDPMALYMRRIHAVPLL
KREDEIVLAREIETGRHQILHALAGYPPAVDALLARHGAASATDAAGDEDDDTPNDESRA
RASARRDALRDALATLRGALHAQGCRSAEYRDARNRVAALLGELGWAVPAVDDASRVVDA
LARAPANAAGDAGTDAACFDAPARRALGAALRDGQQKLGDGTRAMLEANLRLVLSIARKY
VNRGVDLPDLVQDGCLGLMRAIEKFEYRRGFKFSTYATWWIRQAVARAVADRSRTIRVPV
HVGDQSQRVQRHALRFRQRHGRRATPAELAADTGLAEDKLRALLALPAEPLSLDTPLPDA
ETGLVDLIEDQTSASPFERLANTRMRECVSSLLRSVTPTEADVLRRRFGLGGAEPDTYDA
IAQDAGMSRERVRQIEKRALATLRTAAQAEGAQSFLDA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgccacgccccacgcttcgggcggacacgcccctcgatccgatcatccagctg
ctcgcgcgcgccggcgagcagggatatctgacgcacgccgacctcgtcgacgcgctgccg
cccgacaccgacagcgccgatgcgctggaagtcgtgcgcgccgcgctcgcggacatcggc
atcgacgtgctcgacgagccggccgcgcccgcgccgttcgtcggcacgacgccggtcgac
gtcgatcgagacacgctcgacgagagccgcgcgctgctcggcgacctcgcccgcggcgcg
agtgcgtccaccgatccgatggcgctctacatgcgtcgtatccatgcggtgccgctgctc
aagcgcgaggatgaaatcgtgctcgcgcgcgaaattgaaacgggccgccatcagatcctg
cacgcgctcgccggctacccgccggcggtcgatgcgctgctggcgcgccacggcgcggcg
agcgcgacggacgcggccggcgacgaagacgacgacacgccgaacgacgaatcgcgcgcg
cgggcatccgcacgccgggacgcgttgcgcgacgcgctcgcgacgctgcgcggcgcgctg
cacgcgcagggctgccgttcggccgaataccgcgacgcgcgcaaccgcgtggccgcgctg
ctcggcgagcttggctgggccgtcccggccgtcgacgacgcgagccgcgtcgtcgatgca
ctggcgcgcgcgcccgccaacgcggccggcgacgccggcaccgacgcggcgtgcttcgat
gcgcccgcgcggcgcgcgctcggcgccgcgctgcgcgacggccagcagaaactgggcgac
ggcacgcgcgcgatgctggaagcgaacctgcggctcgtgctgtcgatcgcgcgcaagtac
gtgaatcgcggcgtcgatctgccggacctcgtgcaggacggctgcctcggcctgatgcgt
gcgatcgagaagttcgaataccggcgcggcttcaagttctcgacctacgcgacctggtgg
attcggcaggcggtcgcgcgcgcggtggccgaccgctcgcgcacgatccgcgtgccggtg
cacgtcggcgaccagtcgcagcgcgtgcagcggcatgcgctgcgctttcgccagcgccac
ggccgccgcgcgacgccggccgaactggccgccgacaccggcctcgccgaggacaagctg
cgcgcgttgctcgcgttgcctgccgagccgctgtcgctcgatacgccgctgccggacgcg
gaaaccggcctcgtcgacctgatcgaggaccagacctcggcgagcccgttcgaacggctg
gcgaacacgcgcatgcgggaatgcgtgagctcgctgctgcgctcggtcacgccgaccgag
gccgacgtgctgcgtcgccggttcggcctcggcggcgcggagcccgacacctacgacgcc
attgcgcaggacgccggaatgtcgcgcgagcgcgtgcggcagatcgagaagcgcgcgctc
gcgacgttgcgcacggccgcgcaggcggaaggcgcgcagtcgttcctcgacgcatga
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