Burkholderia sp. KJ006: MYA_4987
Help
Entry
MYA_4987 CDS
T02110
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
buk
Burkholderia sp. KJ006
Pathway
buk00300
Lysine biosynthesis
buk00470
D-Amino acid metabolism
buk01100
Metabolic pathways
buk01110
Biosynthesis of secondary metabolites
buk01120
Microbial metabolism in diverse environments
buk01230
Biosynthesis of amino acids
Module
buk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
buk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MYA_4987
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MYA_4987
Enzymes [BR:
buk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
MYA_4987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AFJ89335
UniProt:
I2DXF9
LinkDB
All DBs
Position
2:2263486..2264724
Genome browser
AA seq
412 aa
AA seq
DB search
MSLDSRQLATLAQQYGTPLWVYDADVIRERIAQLRPFDVIRYAQKANSNLHILKLMREEG
ACVDAVSLGEIERSLAAGFSPAGEPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLAR
VGEHAPGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPHAIEIVRRYGLKLVGIH
MHIGSGVDYGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYFNQWD
AARKRIERHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNRRPQHDFVLIDAGFNDLMRPS
MYGSYHAVSVHAPDGTLPAGRPLVDIAIAGPLCESGDVFTQDAGGVVTHRKLPQPQIGDL
LFLHDAGAYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLALETFE
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcgattcccgccagctcgcgacgctcgcgcagcaatacggcaccccgctgtgg
gtgtacgacgccgacgtcattcgcgaacgcatcgctcaactgcgcccgttcgacgtgatc
cgctatgcgcagaaggcgaactcgaacctgcatatcctgaagctgatgcgcgaagaaggc
gcgtgcgtcgacgccgtgtcgctcggcgaaatcgagcgcagcctcgcggccggcttcagc
ccggccggcgagccggaaggcgtcgtgttcaccgccgacctgatcgaccgtccgacgctc
gcggccgtgctgaagcacggcgtgacggtgaacgccgggtcgctcgacatgctcgcgcgc
gtcggcgagcatgcgcccggccatcgcgtgtggctgcgcgtgaaccccggcttcggccac
ggccacagcaacaagaccaacaccggcggcccgcagagcaagcacggcatctggatcgac
gacgtgccgcacgcgatcgagatcgtgcgccgctacgggctgaaactggtcggcatccac
atgcatatcggttcgggcgtcgactacggccacctgtcgcaggtgtgcgacgcgatggtc
gatctcgtcacgtcgctcggccacgacatcgacgccatttcggcgggcggcgggttgtcg
attccgtatcgcgacggcgagccgcgcgtcgacgtcggtcactacttcaaccagtgggat
gccgcgcgcaagcggatcgaacggcatctcggccacgcggtgcgcatcgagatcgaaccg
ggccgcttcctcgtcgccgaggccggcacgctcgtcaccgaagtgcaggccgtgaaccgt
cggccgcagcacgacttcgtgctgatcgacgcgggtttcaacgacctgatgcgtccgtcg
atgtacggcagctaccacgcggtgtcggtgcacgcgccggacggcacgctgccggccggc
cgcccgctcgtcgacatcgcgatcgccggcccgttgtgcgagtccggcgacgtgttcacg
caggacgcgggcggcgtggtcacgcaccgcaagctcccgcagccgcagatcggcgatctg
ctgttcctgcacgatgcgggcgcatacggcgcgtcgatgtcgtcgaactacaacagccgg
ccgctcgcaccggaagtgctcgtcgatcgcggcacgccgcggctgatccgccgccggcag
acgatcggcgaactgctcgcgctcgagaccttcgagtaa
DBGET
integrated database retrieval system