Burkholderia sp. KJ006: MYA_5298
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Entry
MYA_5298 CDS
T02110
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
buk
Burkholderia sp. KJ006
Pathway
buk02020
Two-component system
buk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
buk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MYA_5298
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MYA_5298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
buk03021
]
MYA_5298
Transcription machinery [BR:
buk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYA_5298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AFJ89643
UniProt:
I2DYB7
LinkDB
All DBs
Position
3:278427..279860
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AA seq
477 aa
AA seq
DB search
MSVTLALQMRQHLALTPRLQQSLRLLQLSSLEFQQELRQALDSNPFLEDGQSDDEAPADT
PEHTAEAAPQDTAAERDDVRAPDGDVSYTAAPTMRGTGRQGEDGGDLSPGEWMAAEPSLH
RHLHDALRLYPLNRRDREAARIVIDALDEDGYLRQELGDLLGAADPALLVSEQNLAVALR
LVQMLDRPGIAARSLSECLLLQLDAIPAGTPALAEAKAIARDHLERLARRETAEIQRRVG
CNQQTLQAACALVRGLDPRPGNHYGSTRGDYVVPDVIVRQVRDEWIVTINPAVLPRARLH
ERYATLFAQSSGERDSPLGQQLQEARWLIRNVQKRFDTIQRVGECIVARQRDFFRYGEIA
MKPLVLRDIAEELDLHESTVSRATGNKYMATPHGTFEFKHFFPRKLEAAGKGVCSASAAK
VLIRDMIAAERHTDPLSDVALAQNLAGRGILLARRTVTKYRQAMKIPPAEMRRRDAA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcacgcttgcgctccagatgcgacagcacctggcactcacgccgaggcttcag
cagtcgcttcgtctgctgcagttgtcttcgctcgaattccagcaggaattgcggcaggcg
ctcgactcgaatccgtttctcgaagatggccagagcgacgacgaggcgccggccgataca
cccgaacataccgccgaggcggccccgcaggacaccgcggccgaacgcgacgacgtgcgc
gcgccggacggcgacgtgtcgtacacggcggccccgacgatgcgcggcaccggccgtcag
ggcgaggatggcggcgatctgtcgccgggcgaatggatggccgccgagccgtcgctgcat
cggcatctgcacgacgcgctccggctttatccgctgaaccgccgcgatcgcgaggcggcg
cgcatcgtgatcgacgcgctcgacgaagacggctacctgcggcaggaactcggcgatctg
ctgggcgccgccgatccggcgctgctggtgtccgagcagaatctggcggtcgcgttgcgg
ctcgtgcagatgctcgatcggcccggcatcgccgcgcgctcgctgtccgagtgcctgctg
ctgcagctcgacgcgatcccggccggcacgccggcgctcgccgaagcgaaggcgatcgcc
cgcgaccacctcgaacggctcgcgcgccgggaaacggcggagatccagcggcgcgtcggc
tgcaaccagcagacgctgcaagccgcctgcgcgctcgtgcgcgggctcgatccgcgcccc
ggcaatcactacggcagcacgcgcggcgactacgtggtgccggacgtgatcgtgcgtcag
gtgcgcgacgaatggatcgtcacgatcaacccggccgtgctgccgcgcgcgcgtctgcac
gagcgttacgcgacgttgttcgcgcagtcgagcggcgagcgcgattcgccgctcggccag
cagctgcaggaagcgcgctggctgatccgcaacgtgcagaagcgcttcgacacgatccag
cgcgtcggcgaatgcatcgtcgcgcggcagcgcgacttcttccgctacggcgagatcgcg
atgaagccgctcgtgctgcgcgacatcgccgaggagctcgatctgcacgaatcgaccgtg
tcgcgcgcgacgggcaacaagtacatggccacgccgcacggcaccttcgagttcaagcat
ttcttcccgcgcaagctcgaggcagccggcaagggcgtgtgctcggcatcggccgcgaag
gtgctgatccgcgacatgatcgcggccgagcgccacaccgatccgctgtcggacgtcgcg
ctcgcgcagaacctcgcggggcgcggcattcttcttgcgcgccgtaccgtgaccaagtat
cgccaggcgatgaagatcccgccggccgagatgcgccggcgcgacgccgcatga
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