Burkholderia sp. KJ006: MYA_5946
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Entry
MYA_5946 CDS
T02110
Name
(GenBank) DNA topoisomerase IB (poxvirus type)
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
buk
Burkholderia sp. KJ006
Brite
KEGG Orthology (KO) [BR:
buk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
buk03032
]
MYA_5946
03400 DNA repair and recombination proteins [BR:
buk03400
]
MYA_5946
Enzymes [BR:
buk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MYA_5946
DNA replication proteins [BR:
buk03032
]
Prokaryotic type
DNA Topoisomerases
MYA_5946
DNA repair and recombination proteins [BR:
buk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MYA_5946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AFJ90282
UniProt:
I2E056
LinkDB
All DBs
Position
3:1011007..1012131
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AA seq
374 aa
AA seq
DB search
MRAGREPKSQRAAPGRRLPRCSMTKRPSRSNGGARVDAALRHVDDRHPGYTRRRVRNGFA
YYGQDGQRIRDPDEIARINALAIPPAYTDVWICMDRRGHLQATGRDARGRKQYRYHPLWR
ETRDANKYARMAAFAAALPRIRARVARDLALPGMPRDKIVATIVRLLDTTLARIGNTEYA
RENASFGLTTLRKRHVTIRPGQVRLRFTGKSGIEHDVTVQDPRVGRIVRRCAELPGHELF
QYVDDDGARHSVGSSDVNDYLREAAGAEFTAKDYRTWAGSVQALALLRRIPHESVTQARK
QIVETVRAVAGILRNTPAVCRRCYIHPVVLDTFEAGLLDTFEVTRKPRGLRADEAAFVAL
LEQAERRSARPQKK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccggacgcgaaccgaaatcgcagcgcgcggcccccggccgccgcctgccgcgc
tgcagcatgacgaagcgcccgtcccgctcgaacggcggcgcgcgggtggacgccgcgctg
cgccacgtcgacgaccggcatcccggctatacgcgccggcgcgtgcgcaacggcttcgcg
tattacggacaggacggccagcgcatccgcgaccccgacgaaatcgcgcgcatcaacgcg
ctggcgattccgcccgcgtacaccgacgtgtggatctgcatggaccggcgcggccatctg
caggccacgggccgcgacgcgcgcgggcgcaagcagtaccgctatcacccgctgtggcgc
gagacgcgcgacgcgaacaagtacgcgcggatggccgccttcgcggctgcgctgccgcgg
atccgcgcgcgtgtcgcgcgcgacctcgcgctgccgggaatgccgcgcgacaagatcgtc
gcgaccatcgtccgcctgctcgacaccacgctggcgcggatcggcaacaccgaatacgca
cgcgagaacgcgtcgttcgggctgacgacgctgcgcaagcgccacgtgacgatccggccc
ggacaggtgcggctgcgcttcaccggcaagagcggcatcgagcacgacgtgacggtgcag
gacccgcgcgtgggccgcatcgtgcgacgctgcgcggagctgccggggcacgagctgttc
cagtatgtggacgacgacggcgcgcgccattcggtcggctcgtccgacgtgaacgactac
ctgcgcgaagcggcgggcgcggagttcaccgcgaaggactaccggacctgggccggcagc
gtgcaggcgctggcgctgctcaggcgcatcccgcacgagagcgtcacgcaggcgcgcaag
cagatcgtcgagacggtgcgggccgtcgccggcatcctgcgcaacacgccggcggtgtgt
cggcgttgctacatccatccggtggtgctcgacacgttcgaggccggcctgctcgacacg
ttcgaggtgacgcgcaagccgcgagggctgcgcgcggacgaagcggcgttcgtcgcattg
ctcgagcaggccgagcgccgctcggcccggccgcagaaaaaatga
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