Burkholderia sp. 2002721687: BW21_1240
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Entry
BW21_1240 CDS
T03759
Symbol
ihfB
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
bul
Burkholderia sp. 2002721687
Brite
KEGG Orthology (KO) [BR:
bul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bul03032
]
BW21_1240 (ihfB)
03036 Chromosome and associated proteins [BR:
bul03036
]
BW21_1240 (ihfB)
03400 DNA repair and recombination proteins [BR:
bul03400
]
BW21_1240 (ihfB)
DNA replication proteins [BR:
bul03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BW21_1240 (ihfB)
Chromosome and associated proteins [BR:
bul03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BW21_1240 (ihfB)
DNA repair and recombination proteins [BR:
bul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BW21_1240 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AJY41319
UniProt:
A0AAU8SHJ8
LinkDB
All DBs
Position
I:1328913..1329236
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AA seq
107 aa
AA seq
DB search
MTKSELVAQLASRFPQLVLKDADFAVKTMLDAMSDALSKGHRIEIRGFGSFGLNRRPARV
GRNPKSGEKVQVPEKRVPHFKPGKELRERVDGRAGEPLKNDEPEDGQ
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgagttggtcgcccagttggcatcgcgatttccgcagctcgtgttgaag
gatgcggatttcgcggtgaaaacgatgcttgatgcgatgtccgacgcattgtcgaaaggg
catcgcatcgaaattcgcggcttcggcagcttcggtctgaaccgtcgcccggcgcgcgtc
gggcgcaatccgaagtcgggggagaaggtgcaggtgcccgagaagcgcgtgccgcacttc
aagccaggcaaggaattgcgcgagcgcgtcgacggccgcgccggcgagccgttgaagaac
gacgagccggaagacggccagtga
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