Burkholderia sp. 2002721687: BW21_2250
Help
Entry
BW21_2250 CDS
T03759
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bul
Burkholderia sp. 2002721687
Pathway
bul02024
Quorum sensing
bul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BW21_2250 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BW21_2250 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bul03019
]
BW21_2250 (hfq)
03036 Chromosome and associated proteins [BR:
bul03036
]
BW21_2250 (hfq)
Messenger RNA biogenesis [BR:
bul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BW21_2250 (hfq)
Chromosome and associated proteins [BR:
bul03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BW21_2250 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Mucin-like
Motif
Other DBs
NCBI-ProteinID:
AJY44299
LinkDB
All DBs
Position
I:2487396..2487992
Genome browser
AA seq
198 aa
AA seq
DB search
MANPAESHPQNDFINAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKR
AISTIQLDTGGSRPGGGRGPRAGGPHGGGGRPGGREGGGHGPYGSHGGPRGEGGGYGARE
SRGDGGYGSREPRGDGGYGSREPRGDGGYGAREPREPRESYGAPQEGASAPSGTQERNGN
GPVIVTRRRRSLGPTDGQ
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcctgcagaatcccatccgcaaaacgacttcatcaatgccgcgcgcaaggaa
cgcaagcgcgtcgaaatttatctcgtcaacggtattcgcctgacgggatgcatcgagtcg
ttcgaccagtacctggtgatgctgcgcacgcccgtcggcctgcaaggcatctataaacgc
gccatctcgacgatccagctcgacacgggcggctcccgtccgggcggcggccgcggcccg
cgcgcgggcggcccccacggcggcggcggtcgccccggcggccgcgaaggtggcggtcac
ggtccgtacggctcgcacggcggcccgcgcggcgaaggcggcggctatggcgctcgcgaa
tcgcgcggcgatggcggctatggctcccgcgaaccgcgcggcgacggcggctacggctcg
cgcgaaccccgcggcgacggcggctatggcgcgcgcgaaccgcgcgagccccgcgagtct
tacggcgcgccgcaagaaggcgcatcggcgccctccggcacgcaggagcgcaacggcaac
ggccccgtgatcgtcacgcgccgccgccgttcgctcggtccgaccgacggccaataa
DBGET
integrated database retrieval system