Burkholderia humptydooensis 2002721687: BW21_2574
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Entry
BW21_2574 CDS
T03759
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bul
Burkholderia humptydooensis 2002721687
Pathway
bul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BW21_2574 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bul03400
]
BW21_2574 (recD)
Enzymes [BR:
bul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BW21_2574 (recD)
DNA repair and recombination proteins [BR:
bul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BW21_2574 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
NAT10_TcmA_helicase
SLFN-g3_helicase
RecD_N
DEAD
MukB
CbiA
Flavi_DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJY42183
LinkDB
All DBs
Position
I:complement(2840498..2843170)
Genome browser
AA seq
890 aa
AA seq
DB search
MSVVDERFAWTGGLADRLPEPADFGLALAEGFARRIGMLSRRVGASAAAARWAARAAFAA
SRATAAGHVCVSLRALAQRYDEPFADVRDALAASGVTAFDGIARGAECPLVVDRDGRLYL
ARYFDYETRLANALVARARSGGAAAGGAGELAPDALGERLVRYFGPQKERGVDWQRVAAL
VALTGRVTIVSGGPGTGKTTTVVGVIACLLDAHRDLRIALAAPTGKAAQRMQEALHARAG
SLPAELATRLPRTSYTLHRLLGGGPGGRFAHHRDNPLPYDLVVVDEASMIDVALAAHLLD
ALAPNARLVLLGDKDQLAAVEAGAVFAELSARPGFSSATCATIARALGIGEAEFVAALPD
GFVLDAADAANAGVSPDARAASVASGATARGAAGAVAPAARSTAAVAAAKVAPEAAAQRA
PAPRTGRRGGGRDSKRGVDDAQGSLFAFDDEDAFGVDESGVDMPGVGRPNLDHRDGRASP
DVTRSRRDALPVRARPDSPDAPGIETATHMHAQTGEAIPADLPWDASSAEPAAWIEAGEL
EWLDNAVFSSPERASTDAGSGEQRPATATAAGAGARTPAGRAPAARAEADIEPQASTSAL
PAGAASPDVPSAAPLTDCVVWLERNYRFGLDSPIGRLSLAIRRGAVQDALDALSTADDAA
ARFRDDGGATLSAATVEQLAQGFAGYAAALRDALAAPDPDPLPLFDVLNRFRVLCATRTG
ARGADEVNALVAAEVRRAVRVPLALGAHWFAGRPVMVTRNDYALGLFNGDIGIALPDARG
ALRVWFHGADGRARAVSPAALPPHDTAFALTVHKSQGSEFDDAALILPASFNRVLSRELV
YTAITRARSRVQVIGSRSVLALAIATRTARDSGLAARIADALRVRQEGAR
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggtcgacgaacgtttcgcatggacgggcggcctggcggaccgtctgcccgag
ccggccgatttcgggctcgcgctcgccgaaggcttcgcgcgccggatcgggatgttgtcg
cgccgcgtcggcgcgagcgccgcggccgcgcgctgggcggcgcgcgcggcgttcgccgcg
agccgcgcaacggcggcggggcacgtctgcgtgtcgctgcgcgcgctcgcgcaacgctac
gacgagccgttcgccgacgtgcgcgacgcgctcgccgcgagcggcgtgaccgcgttcgac
ggcatcgcgcgcggcgccgagtgtccgctcgtcgtcgatcgcgacggccggctgtatctc
gcgcgctacttcgactacgagacgcggctcgcgaacgcgctcgtcgcgcgcgcccggtcc
ggcggcgcggcggcgggcggcgccggcgaacttgcgcccgatgcgctcggcgagcggctc
gtccgctatttcgggccgcagaaggagcggggcgtcgactggcagcgcgtcgcggcgctc
gtcgcgcttacgggccgcgtgacgatcgtgagcggcgggccgggcaccggcaagacgacg
acggtcgtcggcgtgattgcgtgcctgctcgacgcgcaccgggacttgcggatcgcgctc
gccgcgccgaccggcaaggcggcgcagcggatgcaggaggcgctgcacgcgcgcgccggc
agcctgccggccgagctcgcgacgcgtctgccgcgcacgtcctatacgctgcaccggctg
ctgggcggcggcccgggcgggcgcttcgcgcatcaccgcgacaacccgctgccgtacgat
ctcgtcgtcgtcgacgaggcgtcgatgatcgacgtcgcgctcgccgcgcacctgctcgac
gcgctcgcgccgaacgcgcgcctcgtgctgctcggcgacaaggatcagctcgcggccgtc
gaggcgggcgcggtgtttgccgagctgagcgcgcgtcccggattcagctcggcgacgtgc
gcgacgattgcgcgcgcgctcggcatcggcgaggccgagttcgtggcggcgctgccggac
ggatttgttcttgatgcggccgatgcggcgaacgcgggcgtgagcccggacgcacgcgcg
gcttcggtcgctagcggtgcgacggcgcgcggggcggccggcgcggtggcgcccgccgcg
cgatcgacggctgccgttgccgcggcgaaggttgcgccggaagccgccgctcagcgcgcg
ccggcgccgcgcacgggccggcgcggcggcgggcgagactcgaaacggggcgtcgacgat
gcgcaggggtcgctgttcgcgttcgacgatgaagacgcgttcggcgtggatgaatcgggc
gtcgatatgccgggcgtcgggaggccgaacctcgatcaccgggacggccgcgcatcgccc
gacgtcacgcgcagccggcgtgacgcgctccccgtgcgtgcccggccggattcgccggac
gcgcccggcatcgagactgccacgcacatgcatgcgcagaccggcgaagccatccccgcc
gatttgccgtgggacgcgtcttccgccgagccggccgcatggatcgaagcgggcgagctc
gagtggctcgacaatgcggtcttttcgtcgcccgaacgcgcttcgacggatgccggatct
ggcgagcagcgccccgcgactgcaacggcagccggcgcgggcgcacgcacgcctgccggc
cgcgcgccggctgcccgcgccgaggcggatatcgaaccgcaagcgtcgacgtcggcgctc
ccggccggggccgcgtcaccggacgttccctccgccgcgccgttgaccgactgcgtcgtc
tggctcgagcgcaactatcgcttcggcctcgattcgccgatcggcagactgtcgctcgcg
attcgccgcggcgccgtgcaggacgcgctcgatgcgttgtcgacggccgacgacgcggcc
gcgcgcttccgcgacgacggcggcgcgacgctgtcggccgcgacggtcgagcaactcgcg
caaggcttcgccggctacgcggccgcgctgcgcgacgcgctcgcggcgcccgatcccgat
ccgctgccgctcttcgacgtgctcaaccgctttcgcgtgctctgcgcgacgcgcacgggc
gcgcgcggcgcggacgaggtcaatgcgctcgtcgcggccgaggtgcgccgcgcggtgcgc
gtgccgctcgcgctcggcgcgcactggttcgccgggcggcccgtgatggtgacgcgcaac
gattacgcgctcggactcttcaacggcgacatcggcattgcgctgcccgacgcgcgcggg
gcgctgcgcgtctggttccacggcgcggacggccgcgcgcgcgcggtgtcgcccgccgcg
ctgccgccgcacgacacggcgttcgcgttgaccgtccacaaatcgcagggctcggagttc
gacgacgcggcgctgatcctgcccgcgtcgttcaaccgcgtgctgtcgcgcgaactcgtc
tataccgcgatcacgcgcgctcgctcgcgcgtgcaggtgatcggctcgcgctcggtgctc
gcgcttgcgatcgcgacgcgcacggcgcgcgactccggcctcgccgcgcggatcgccgat
gcgctgcgcgtccggcaggagggcgcgcgatga
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