Burkholderia humptydooensis 2002721687: BW21_2849
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Entry
BW21_2849 CDS
T03759
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bul
Burkholderia humptydooensis 2002721687
Pathway
bul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BW21_2849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bul03019
]
BW21_2849
Enzymes [BR:
bul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BW21_2849
Messenger RNA biogenesis [BR:
bul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BW21_2849
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
aq_1923
Motif
Other DBs
NCBI-ProteinID:
AJY41985
LinkDB
All DBs
Position
I:complement(3161819..3163267)
Genome browser
AA seq
482 aa
AA seq
DB search
MSDSVAKPVDATFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTG
KTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAV
VFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLP
DLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRDPQTIEVARSNAAASTVTQIVYDVA
EGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQIERDGIVAAAIHGDRSQSERMQAL
DAFKRGEIEALVATDVAARGLDIVELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSL
CSPNERKQLADIEKLIKRTLSLETLELDLPRHRHDERGGRRERDRDERRGASAGRRSAGG
ERAYHPRREAPIDDFFLKPYVPSPSASKPEEATPVQPEKKAPKQPLAALLGGFGMPRKTS
SS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattctgttgccaagcctgtcgacgcgacgttcgatcaattcggccttgccgcc
gagatcctgaaagcgattgccgagcagggctatacgacgccgacgccgatccaggcgaag
gcgattccggtcgtgctgtccggccgcgacgtgatgggcgccgcgcagaccggcaccggc
aagaccgcgagcttttcgctgccgatcatccagcggctgctgccgcaggcgaacacgagc
gcgtcgcctgcccgccatccggtgcgtgcgctgatcctcacgccgacccgcgagcttgcc
gatcaggtcgccgcgaacgtgcacgcgtacgcgaagcacacgccgctgcgcagcgccgtc
gtgttcggcggcgtcgacatgaacccgcagatggccgagttgcgccgcggcgtcgagatc
ctgatcgcgacgccggggcgcctgctcgatcacgtccagcagaagaccgcgaatctcggt
caggtgcagatcctcgtgctcgacgaggccgaccggatgctcgacatgggcttcctgccc
gatctgcagcgcatcctgaacctgctgccgaaagagcgtcagacgctgcttttctcggcg
acgttctcgcccgagatcaagaagctcgcgtccacctacctgcgcgatccgcagacgatc
gaggtcgcgcgcagcaacgcggccgcgtccaccgtcacgcagatcgtctacgacgtcgcc
gagggcgacaagcaggcggccgtcgtcaagctgatccgcgaccgctcgctcaagcaggtg
atcgtgttctgcaacagcaagatcggcgcgagccgccttgcgcgccagatcgagcgcgac
ggcatcgtcgcggccgcgattcacggcgaccgttcgcagagcgagcggatgcaggcgctc
gacgcgttcaagcgcggcgagatcgaagcgctcgtcgcgaccgacgtggcggcgcgcggc
ctcgacatcgtcgaactgccggccgtcatcaacttcgatctgccgttcaatgcggaagac
tacgtgcaccggatcggccgcacggggcgcgcgggcgcgtcgggcgacgcgctgtcgctg
tgcagcccgaacgagcgcaagcagcttgccgacatcgagaagctgatcaagcggacgctg
tcgctcgaaacgctcgagctcgacctgccgcgccatcgccatgacgagcgcggcggccgc
cgcgagcgcgaccgcgacgagcgccgcggcgcatcggccggccgccgttcggcgggaggc
gagcgcgcgtatcatccgcgccgcgaagcgccgatcgacgatttcttcctgaagccgtac
gtgccgtcgccgtccgcgagcaagccggaagaggcgacgcccgtgcagccggagaagaag
gcgcccaagcagccgctcgccgcgctgctgggcgggttcgggatgccgcgcaagacgtcg
tcgtcgtga
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