Bulleidia sp. zg-1006: JOS54_03430
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Entry
JOS54_03430 CDS
T07046
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bull
Bulleidia sp. zg-1006
Pathway
bull03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bull00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JOS54_03430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bull03019
]
JOS54_03430
Enzymes [BR:
bull01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JOS54_03430
Messenger RNA biogenesis [BR:
bull03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JOS54_03430
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
AAA_22
ERCC3_RAD25_C
UvrD-helicase
HEM4
AAA_19
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QRG87372
LinkDB
All DBs
Position
682269..683561
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AA seq
430 aa
AA seq
DB search
MTFNELNLIQPLLDSLKKANYEQPSPIQEKAIPVLLEGYDLIACAQTGTGKTATFALPIL
QSLPEEKEHTIRALILTPTRELASQIFDNIKMFGRYRRFRACCVYGGAPSGPQLKALRSG
CDILIATPGRLLDYLEHGKLSLKQVEFFVLDEADRMLDMGFITDIRKIVMQIPKERTTAL
FSATMPKEIQVLAKDILNHPKEVRIETEKFTAETIDQYLIYTEKASKKKVLVDLLGSALS
KKVIVFTRTKIGADRLEKYLKEKEIPCLAIHGNKTQGQRLNALQRFRTNQVKVLLATDVA
ARGIDIKDITHVINFDLPEDIENYVHRIGRTGRANKEGVSISLVCKEELNLLASIEDYIQ
FQIPLKQSSYSLPLERKKKRSLNLNKKAKRNTETKKPSSMKMNHKKKKSFHEDLIPQKEV
SKKAKKIYRF
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaatgaattaaatctaattcaaccattattagattcactaaaaaaggctaac
tatgaacaacctagtcccatccaagaaaaagccattccagttctattagaaggctatgat
ttaatcgcttgtgcacaaactggaacaggaaaaaccgcaacctttgcactacctatttta
caatctttaccagaagaaaaagaacatacgattcgagctttgattttaacaccaaccaga
gaactagcttcacaaatattcgataatatcaaaatgtttggtcgctataggcggttcaga
gcttgttgtgtatatggaggagcaccatctggtccacaattgaaagcacttcgcagtggt
tgtgatatcttaattgcgacacccggtcgtttattagattatttagaacatggtaagctt
tctttaaaacaagtggaattctttgttctcgatgaagcagatcggatgttggatatggga
ttcatcaccgatatcagaaaaatcgtgatgcaaattccaaaggaaagaaccacggcttta
ttttcagccactatgccaaaagaaattcaagttttagctaaggacattttaaatcatcca
aaagaggttcgtattgaaacggaaaaattcactgctgaaaccattgaccaatatttaatt
tacactgaaaaagcaagtaagaaaaaagttttggtagatttgctgggttctgctttatct
aagaaggttattgtttttacaagaacgaaaataggtgctgaccgtttagaaaaatactta
aaagaaaaagagattccttgtttggctattcatggtaataaaacacaaggacaacgattg
aatgctttacaaagatttcgtaccaatcaagtaaaagttcttttagcaaccgatgtggcg
gcgagaggaattgatattaaagatataacacatgtgattaactttgatttaccggaggat
attgaaaactatgtgcatcgcattggtcgaacgggtcgtgctaacaaagagggtgtatcg
atttctttggtgtgcaaagaagagctgaatttattggctagtattgaggactacattcaa
ttccaaattcctttaaaacaaagttcttattcgctaccactggaaagaaaaaagaagaga
agcctaaatctaaacaaaaaggcaaaaagaaatacagaaacgaagaaaccttctagtatg
aaaatgaatcataaaaagaaaaaaagtttccatgaagacttaattccacaaaaggaagtt
tctaaaaaggcaaaaaagatttaccgtttttaa
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