Bulleidia sp. zg-1006: JOS54_03930
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Entry
JOS54_03930 CDS
T07046
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bull
Bulleidia sp. zg-1006
Brite
KEGG Orthology (KO) [BR:
bull00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bull03019
]
JOS54_03930
03009 Ribosome biogenesis [BR:
bull03009
]
JOS54_03930
Enzymes [BR:
bull01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JOS54_03930
Messenger RNA biogenesis [BR:
bull03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JOS54_03930
Ribosome biogenesis [BR:
bull03009
]
Prokaryotic type
rRNA helicases
JOS54_03930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HisZ-like
Motif
Other DBs
NCBI-ProteinID:
QRG86030
LinkDB
All DBs
Position
complement(787187..788557)
Genome browser
AA seq
456 aa
AA seq
DB search
MKKFEDLHIQEPLKQWLRDKHFKEMTAIQEEVIPLSLQGKDIIGLSETGSGKTHAFLVPI
FEKIDVASDYVQAVITAPTRELAYQIYAMAKEVEAYFPSIRISAVVGGKERARDSKKFQL
QQPHVVIGTPGRLRDLFLEDNSLRLDKAKVMVVDEADMTLEFGFLADVDAIVSRMNDVQM
LSFSATLPNQLKPFIRKYMHHPITIEIGKHQSNNKNIEHVLVPCYHRSYAETILKIMPGF
NPYVCLIFANSRKEAHEIAQELRDHGVKLTELHGDLSSRERKQAMKQITQSQYEYVIATD
LAARGMDIGEVGFVISCGFPNDLEYYIHRAGRTGRAGLSGTCYALYHEQDDEAIRSLMKQ
GIPFKHRRFHHHNWQDLRPYGQRRAKKDTEMQKQIAKMMTKKKRKVKPGYKKKREAEIDK
LYRRKKRDFIRSKIKEEKKARYKQRAKELRDGNEKA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtttgaagatttacacatacaagaaccattaaaacaatggttgagggataaa
cattttaaagaaatgactgccattcaagaggaagtcattcctttatcattgcaagggaaa
gatataattggtctatccgaaacaggctccggtaagacacatgcgtttttagtgcctatt
tttgaaaaaattgatgttgccagcgattatgtccaagccgtgattacagcgcctacgcgt
gaactggcttatcaaatttatgcgatggcaaaagaagtggaagcttattttccaagcatt
cgcattagtgctgttgtgggtggtaaggagcgggcaagagatagtaagaagtttcaacta
caacaaccgcatgttgtgattggtacaccaggtcggttgagggatttatttttagaagat
aattctttgcgtttagataaagcgaaagtaatggttgtggatgaagccgacatgactctg
gagtttggtttcttagcggacgtggatgcgattgtttcgcgaatgaatgatgtacaaatg
ttgtcattttcagctactttaccaaaccagttaaagccttttattaggaagtatatgcat
catccaattaccattgaaattggtaaacatcaatccaataataagaatattgagcatgtg
ttagtgccttgttaccacagaagctatgccgaaaccattttaaagattatgcccggcttt
aatccttacgtctgtttaatatttgcgaattcgcggaaagaagcgcatgagattgcccaa
gaattgcgtgaccatggtgttaaattaactgaattgcatggtgatttaagttcacgtgaa
cgtaaacaagccatgaaacaaattacccaatcacaatatgaatatgtgattgcgacagat
ttggcagcccgtggtatggatattggtgaagttggttttgttatttcttgtggctttcct
aatgatttagaatactacattcatcgtgctggtcgaaccggtcgagcaggactatccggt
acttgttacgcattgtaccatgagcaagatgatgaagctattcgttctttaatgaaacaa
ggtattccatttaaacaccgccgtttccatcaccataattggcaagaccttcgtccttat
ggtcaacgtcgagcaaaaaaagatacggaaatgcagaaacagattgctaaaatgatgacc
aagaaaaagaggaaggttaaacctggttataaaaagaaaagagaagcggaaattgataaa
ctctatcgtcgtaaaaagagagattttattcgttccaagattaaagaagaaaagaaggct
cgttataaacaaagagcgaaagagctaagagatggcaatgaaaaagcttag
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