Bulleidia sp. zg-1006: JOS54_04205
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Entry
JOS54_04205 CDS
T07046
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bull
Bulleidia sp. zg-1006
Pathway
bull03420
Nucleotide excision repair
bull03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bull00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JOS54_04205
03430 Mismatch repair
JOS54_04205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bull03400
]
JOS54_04205
Enzymes [BR:
bull01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JOS54_04205
DNA repair and recombination proteins [BR:
bull03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JOS54_04205
MMR (mismatch excision repair)
Other MMR factors
JOS54_04205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
Viral_helicase1
ADDB_N
DEAD
PhoH
UPF0172
Motif
Other DBs
NCBI-ProteinID:
QRG86084
LinkDB
All DBs
Position
complement(839408..841267)
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AA seq
619 aa
AA seq
DB search
MINLEEFNEQQKEAVVSEEKYLRVVAGAGSGKTKVLTSRIVYLMEEKKESPSQILAITFT
NKAANEMRNRVFKMIGEMGHSPTICTVHSLGLKILRSESEFNDDFRNFGILDSKDQDNIL
EEIYETFGFYKQEIPYTSAKTFISNAKTKKQRAQELYSQNAKKKLVQIYEEYLKKQEKLY
VYDFDDFIIKSVELLEKNEDFLKYWQEKFTHILVDEFQDIDKQQFQLIRLLVGEKNNLFV
VGDPDQSIYTWRGAEVEIIDNLEEAYPSLKTVLLEQNYRSSKSILEVANQLIKNNKERIE
KNLFTKKSGEKVQVNWFKNRKRECAFVAKKIINLHEKGVKYRDIAVLYRANYLSREVENQ
MDVYDIPYGIYGGYRFFDRMEIKDVLAFLRVIVLEDDLSLMRIINKPKRFIGKTTIEKGL
ELAGEEKISLFTALSKLETTEKTKKSIENFKAIILKWRELLQTQKIKFSEFTNGLLSDLG
YFELLNYDGTGERKENIIEFFKDLDSFESEYPNESLFVYLEQVFLRSQKYDENVDKVKLM
SVHSAKGLEFHTVFVVDMDDGVFPNKKALGGRKGKEEERRLAYVALTRSKEKLFISYTGF
SSEFIDEIADNKHICKTIH
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgattaatttagaagaatttaacgagcaacaaaaagaagcggttgtcagtgaagaaaaa
tatctaagagttgttgctggagcaggttcagggaagacaaaagtactaacaagtagaatt
gtatatttgatggaagaaaagaaagaaagtcccagccaaattctagcgattacttttacg
aataaggcggcgaatgaaatgcgaaatagagtttttaaaatgattggggaaatgggtcat
tctccaaccatttgtacagtgcattctttgggcttaaaaattttacgcagtgaaagtgag
ttcaatgatgattttagaaattttggtattttagattcaaaagaccaagataatattttg
gaagaaatttatgaaacctttgggttttacaaacaagaaattccgtatacttctgctaaa
acatttatttctaacgctaaaaccaagaaacaaagggcacaggaattgtatagtcaaaat
gcgaagaaaaaattagtgcaaatatatgaagaatatctaaaaaaacaagaaaaattgtat
gtttatgattttgatgactttatcattaaaagcgttgaactcttagaaaaaaacgaggat
tttttgaagtattggcaagaaaaatttacccatattttagtagatgaatttcaagatata
gacaagcaacaatttcaattaatacgtttattggttggagaaaagaataacttgtttgtt
gtaggcgaccctgaccaaagcatttatacatggcgtggggcagaggttgaaattattgac
aatttagaagaagcttatcctagtttgaaaacagttctgctagagcagaattatcgttca
agtaaaagtattttagaagtagcaaaccaactgattaaaaacaacaaagaacgaattgaa
aaaaatcttttcactaaaaaaagtggtgaaaaggttcaggtaaactggttcaaaaataga
aaacgagaatgtgcttttgtggcaaagaaaataatcaatcttcatgaaaaaggggtgaag
tatagagatattgctgtattatatcgagcaaactatttgtcaagagaagtggagaatcaa
atggatgtatacgatattccttatggaatatatggtggttatcgtttctttgaccgaatg
gaaattaaggatgtattagcttttttaagagtaatcgtgttagaagatgatttatcttta
atgagaattattaataaaccaaaacgttttattggtaaaacaacgattgaaaaaggctta
gaattagcaggagaagaaaaaattagtcttttcacagccttgtcaaaacttgaaacaacc
gaaaaaacaaaaaaaagtatagaaaatttcaaagcgattattcttaaatggagagaatta
ttacagacgcaaaaaataaaattttcagagtttactaatggtttattatccgatttaggt
tactttgaactattaaattatgatggaaccggcgaaagaaaagaaaatattattgagttt
ttcaaagatttagattcctttgaaagtgaatatccaaatgaatcactgtttgtataccta
gagcaagtatttttgagaagccaaaagtacgatgaaaacgttgataaagttaagctgatg
agtgttcattcagctaaagggttagaatttcacacagtatttgtggttgacatggatgat
ggtgtttttcctaacaaaaaagccttagggggaaggaaaggaaaagaggaagaaagacgt
ttagcttatgtggctttgacgagatcgaaagaaaaattatttatttcatacactggattt
tcatcagaattcattgatgaaattgcagacaataaacatatttgtaaaacaatccattag
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