Bulleidia sp. zg-1006: JOS54_04615
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Entry
JOS54_04615 CDS
T07046
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bull
Bulleidia sp. zg-1006
Pathway
bull03410
Base excision repair
bull03430
Mismatch repair
bull03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bull00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JOS54_04615
03430 Mismatch repair
JOS54_04615
03440 Homologous recombination
JOS54_04615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bull03400
]
JOS54_04615
DNA repair and recombination proteins [BR:
bull03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
JOS54_04615
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JOS54_04615
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JOS54_04615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Med17
T6PP_C
Laa1_Sip1_HTR5
Motif
Other DBs
NCBI-ProteinID:
QRG86162
LinkDB
All DBs
Position
complement(924319..925893)
Genome browser
AA seq
524 aa
AA seq
DB search
MMWNKQKIEYNPYPVENLVGKLLSMVTEDETKIQEVLSAPREIVYSKADCVLKCVERLKM
AKEKQEKVLIAGDYDCDGVCSTGIMKYSLDQYGIKNGYYIPGRVKEGYGLQVHTVELAKE
KGYSLILTVDNGVKAFPALEKAKELGIEVIVTDHHQIEEPVPVDILVHPTFMEKEYRYFS
GAGVALEISYYLIGEVKEMIALAGVAALGDVMPPFAQTRTLIQKAVQYLQEGCVPALQKL
VSKGSQIDVQTLQFTIIPKLNSLGRMSHLANVNQLVKYLLTKNEEAQNKMAKQIDQINQE
RKKASQLKAKELENKVQGKAIEVLYDPDLLEGICGQIAGRITNQIKRPCLVLTKTDGDII
KGSGRSVPGVNLFEALKDFAFFESFGGHEQACGLSVSEENFSAFQTYVANLQLESQEDKG
KDVLVLEPEDLSFKAVQALMNLEPYPSEWKEPLICIEKPDFIEFKAYSSMQKYSFKVNGE
KVEAILYANKGIQANLQASHFIGTLSINSFRNQEKIQMVIEDLW
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggaataaacaaaagatagaatataatccttatcccgtagaaaacttagtgggt
aagctattaagcatggtgacagaagatgaaaccaaaattcaagaagttttatcagcgcct
agagaaattgtatattccaaagctgattgtgttttaaagtgtgttgagcgtttaaaaatg
gcgaaagagaaacaagagaaagtcttaattgccggcgattatgattgtgatggtgtttgt
tcaaccggtatcatgaaatatagcttggatcaatatgggattaaaaatggttattatatt
ccgggccgcgtcaaagagggctatggcttacaagtgcatacggttgagctggcgaaagaa
aaaggttattctttgattttgacagtggataatggtgtaaaagcctttcccgctttggaa
aaagcgaaagagctaggtattgaggtaattgtgaccgaccatcaccaaattgaagaaccg
gttccggtggatattcttgtgcatccaacttttatggaaaaagagtatcgttatttttca
ggagcaggagtggctttagaaatttcttattatctaattggtgaagtcaaagaaatgatt
gccttagccggggttgctgccttgggggatgtgatgcctccctttgcacaaacacgaact
ttaattcaaaaagcagttcaatatttgcaagaaggttgtgttcccgctttgcaaaaatta
gtttctaagggtagtcaaatcgatgttcaaacacttcaatttactattattcctaagtta
aatagtttaggaagaatgagccatttagcgaatgtgaaccaattagtcaagtacttatta
accaagaatgaagaagcccaaaacaaaatggccaagcagattgatcaaatcaatcaagaa
agaaaaaaagcttcccaactgaaagcaaaagaattggaaaataaagtgcaggggaaagcg
attgaagttctttatgatccagatttgttagaagggatttgtgggcaaattgcaggtcga
ataacaaaccaaattaaacgtccttgtttggtgttaacgaaaaccgatggtgatattatc
aagggaagtggtcgttctgttccgggtgtgaatttatttgaagctttaaaagactttgcg
ttttttgaaagctttggtggtcatgaacaggcttgtggtttaagtgtttcagaagaaaat
ttttcagcttttcaaacctatgtcgccaatcttcagcttgaaagtcaagaagataagggc
aaagatgtattggtcttggaaccggaggatttaagctttaaggcagtgcaagctttaatg
aatttagaaccttatccaagtgaatggaaagagccattgatttgtattgaaaaaccggat
tttattgaatttaaagcctattcttctatgcaaaaatacagttttaaagtaaatggagaa
aaagtagaagctattctttatgctaataaaggcattcaagccaatttacaagcttcccac
tttattggcaccctttccattaattcttttcggaatcaagagaaaatccaaatggttatc
gaagatttatggtga
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