Bulleidia sp. zg-1006: JOS54_06270
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Entry
JOS54_06270 CDS
T07046
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bull
Bulleidia sp. zg-1006
Brite
KEGG Orthology (KO) [BR:
bull00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bull03009
]
JOS54_06270 (rlmD)
Enzymes [BR:
bull01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
JOS54_06270 (rlmD)
Ribosome biogenesis [BR:
bull03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JOS54_06270 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAM
Motif
Other DBs
NCBI-ProteinID:
QRG86452
LinkDB
All DBs
Position
complement(1234357..1235376)
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AA seq
339 aa
AA seq
DB search
MKKNEEYVVEISGYTTEGFAVAKLDSFVLFIPGLLKGEKARVTLTKVEKTYAFARISEIL
EKSKERVEPSCSIARLCGGCQLQFMSYKEQLSLKQEMVQSHFLKHHLDLGIIQEILPSPK
QERYRNKVQVPIQEKDNLAQFGFYRKHSHDVVVYEDCKVETEESNQITHFVRDFLNQHHL
ADNFRYLFIRHVHRRDELMVMPIVRKYPFVEARELGEALVKKFSNITSFSYLLNPKETNV
ILDGPIFEVIGPLFLQESLLGMEFQLSAKAFFQVNPYATEILYTKALELADILSEDTVVD
LYCGFRVIIMIQANSSVKSKVLKLLPKLKTEETDSLCVA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaatgaagagtatgtggttgaaattagtggttatacaacagaaggttttgcg
gtagcgaaactggattcttttgtgttgtttattcccggacttttaaagggtgaaaaggct
agagtgaccttgaccaaggtcgagaaaacttatgcgtttgctcggatttcagaaatcttg
gaaaaatcgaaggaaagagtggagccaagttgttccattgctcgtttgtgtggtggttgt
caactgcaatttatgtcttataaggaacagctttctttgaaacaagagatggtacaaagt
cattttttaaagcaccatttggacttaggaattattcaagaaattttaccctcaccaaag
caagagagataccgcaataaagttcaggttcctattcaggaaaaagataatctagcacaa
tttggtttttatcggaaacattcacatgacgtggttgtgtatgaagattgcaaggtagaa
acagaagagtcaaatcaaattacacattttgtaagagattttttaaatcaacatcatttg
gcagataattttcggtatttgtttatccgtcatgtgcatcgtagagatgaattgatggtg
atgccgattgtacgcaagtatccttttgttgaggcaagggaactaggtgaagcgttggtg
aaaaaattttcaaacattacttctttttcgtatttattaaatcctaaggaaacaaatgtc
attttggacggacctatttttgaagtgattggtcctttattcttacaggaatctttattg
ggaatggagtttcaattatcagctaaggctttctttcaggtaaatccttatgcgacggaa
attttatatacgaaggctttggagttggcggatattttaagtgaagatacggttgtggat
ttgtattgtgggtttcgtgtcataataatgatacaggcaaatagttcagtaaaatcaaag
gttttgaagcttctaccaaagttaaaaactgaagaaactgatagtttatgtgttgcttag
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