Bulleidia sp. zg-1006: JOS54_06300
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Entry
JOS54_06300 CDS
T07046
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bull
Bulleidia sp. zg-1006
Pathway
bull03420
Nucleotide excision repair
bull03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bull00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JOS54_06300
03430 Mismatch repair
JOS54_06300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bull03400
]
JOS54_06300
Enzymes [BR:
bull01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JOS54_06300
DNA repair and recombination proteins [BR:
bull03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JOS54_06300
MMR (mismatch excision repair)
Other MMR factors
JOS54_06300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
PPR_3
SAPIS-gp6
Helicase_RecD
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QRG86458
LinkDB
All DBs
Position
complement(1241266..1243443)
Genome browser
AA seq
725 aa
AA seq
DB search
MIGHKFIRKRSSVLDIQSLNSQQKTAVLDEHQYLRIIAGAGSGKTRVLTMRIAYLMEEKK
VWPHKILAITFTNKAAREMESRVLKMMKEEGTKPTICTIHSLCVRILRQEIEAMGYPKNF
TVLDTEDQKAILKEYYKEHSIDKNEISFAHALNYISNNKAENVSVEEANKIADFSSLEKK
KVQIYEYYLRRQKELFALDFDDLILWTVRMFDQYDVILQKWQRYFHYILVDEFQDIDRIQ
YKLIKQLAGKDNSLLVVGDPDQTIYTWRGADVRIIVNFEKDFPDAQTILLTQNYRSTNAI
LNGANSVIKNNKQRVDKELFTDNQSKEKIYHFSAVSDEYQATWIAQKMKSIRLQTGTYSE
IAVLYRANYLSRSLEKALMDERIPYIIYGGLRFFERQVVKDALSYLRLIVSGDDLSLNRI
LNRPKRGLGSKTLETIATRARELNCSQLEILQKEKLFKGKTQITIDQFVQKVERWHTLQE
KKEVKLLTLFERVMDESGYRAFLEAEKDMDNLGHLKSLMEDIQDFERYHPETNLEEYLQS
VALYGDREETLENDFVQLMTVHASKGLEFDTVFVSDLNEGVFPSERSLQEGHRGVEEERR
LAYVAFTRARKHLYLTDAGGYSFMLQRVKTPSRFIDEIEEDYIEHKGTPKLQTNQESSFY
ARFNENPTEKRKKWKKGDIIEHAKFGEGVVIQQEGEFVTIAFAYPFGTKRLQASHPSLKV
KNLRS
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgataggacataagttcattagaaagaggtcttctgtgctagatatacaatccctaaat
tcgcaacaaaaaacagccgtgctagatgaacatcagtatctaagaattattgccggagca
ggttctggaaaaacgcgtgttttaaccatgcgtattgcgtatttgatggaagaaaagaaa
gtttggccgcataagatattggcgattacctttacgaataaggcggctagagaaatggaa
agtcgtgttttgaagatgatgaaagaagaaggtacaaagccaaccatttgcaccattcac
tctttgtgtgtgcgtattcttcgtcaagaaattgaagcaatgggttaccctaagaacttc
accgttttagatacggaagaccaaaaagccatcttgaaggaatattataaagaacattct
attgataaaaatgagatttcctttgcgcatgctttgaattatatttccaacaataaagca
gagaatgttagcgtggaagaagcgaataaaatagctgatttttcttcattagaaaagaag
aaggttcaaatttatgagtactatcttcgtcgccaaaaggaactgttcgcattggatttt
gatgatttaattctctggaccgttcgtatgtttgatcaatacgatgtcatcttacaaaag
tggcaacgctatttccattatattttagtggatgagtttcaagacattgaccgtattcaa
tataaactcattaaacaattggctggaaaagacaattctttacttgtggtgggtgatcct
gatcaaaccatttacacatggcgtggagctgatgtgcggattattgtaaattttgaaaaa
gatttcccggatgcacaaacgattttattaacacaaaattaccgtagcacgaatgcgatt
ttaaatggggctaactcggtgattaaaaataataaacaacgcgtggataaagaattattt
accgataatcaatccaaagaaaaaatctaccatttttcagctgtgagtgatgaataccag
gcgacttggattgctcaaaaaatgaagtcaattcgtttgcaaacagggacgtattcagaa
attgcggttttatatcgagcaaattatttatcccgttctttggaaaaagctttaatggat
gaaagaattccatacatcatctatgggggcttacgtttctttgaacgccaggttgttaag
gatgctttatcatatttacgattgattgttagcggagatgatttatctttaaatcgcatt
ttaaatcgaccaaagcgtggcttaggatcaaaaaccttagaaaccattgctacgcgagca
agagagttaaattgtagtcaattagaaattttacaaaaagaaaaattattcaaaggaaaa
acccaaattaccatcgaccaattcgtacaaaaggtagaaagatggcatacactacaggaa
aagaaagaagtaaagctcttgacactttttgagagggtgatggatgaatcgggctaccgt
gctttcttagaagctgaaaaagatatggataatttaggtcacttgaaatccttaatggaa
gatattcaagattttgaacggtatcatccggaaactaatttagaggaatacctacaatct
gtggctttatatggggatcgtgaagaaaccttagaaaatgattttgtgcaacttatgacg
gtgcatgcttcaaagggattggaatttgatacagtgtttgtttcggatttaaatgaaggt
gttttcccatctgaacgttcacttcaagagggtcatcgcggtgtggaagaggaaaggcgc
ttggcgtatgtggctttcacaagagcgcgtaaacatttatacctaacggatgcggggggt
tattcgtttatgttacaaagagtgaaaacaccatcccgttttattgatgaaattgaggaa
gactatattgagcataaaggaacgccaaagctacaaaccaatcaagaatcttctttctat
gcccggttcaatgaaaacccaactgaaaagaggaaaaagtggaaaaaaggagacatcatt
gaacacgctaagtttggagagggtgttgtcattcaacaagaaggggaattcgtcaccatt
gcctttgcctatccttttggtaccaagcgtttgcaagcttcacatccatctttaaaagtg
aagaatttaaggagttaa
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