Bulleidia sp. zg-1006: JOS54_07665
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Entry
JOS54_07665 CDS
T07046
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bull
Bulleidia sp. zg-1006
Brite
KEGG Orthology (KO) [BR:
bull00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bull03400
]
JOS54_07665
Enzymes [BR:
bull01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JOS54_07665
DNA repair and recombination proteins [BR:
bull03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JOS54_07665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
SHNi-TPR
Dna2
Motif
Other DBs
NCBI-ProteinID:
QRG86706
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All DBs
Position
1505868..1508447
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AA seq
859 aa
AA seq
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MKKIVANAPLQQQLYHRYFKEKNGLVSGVQIAPLSSYLNQDFQDPLIFMWSIQAELRKAD
FSLFPSYAGMLQYPSFVQEVIHFAKDCIAFGIQKKDLPENDKLEKELKELIGLVLQSSLL
DAYRNAIEQNKQLDLSSLEVKDIVLEDDYHSHLLKGKLPSRSFFQETISDLRTALNIRQE
MEVMAQEICSFKGSVNIVLSQYSSQFPILKQVFHRYGIPFSAYQQEQPSLVGRIFKDLFL
VAYQQDVKAFLDLIENNAFHHSLSKDEQNVLSKYLSKVEPESPKLPIQSMEELWSDEAKA
YARYQERINAFYLAIQENLSTLLQAGTIVDKLKQSYDVFITLPFLKNLQEQKLASSLESF
LNQIGDQVDEDNLPFFLELLDHFKSFCLPSEIGPIMVTDLRHPVLQAELSYIIGLNSDAY
PNIPNKSGIFNEDYYAQLSYPSYEERYETYLSQLSWIFHSGKQIHFSYSQKDYEGKKLEA
SYAIQSLFTKKSQIIKAKELLPRKTNQHEENLSPSFMQEWFTQNPVVKGSVSSIEEWYRC
PYQYFLSRLLKIQEQSSFEPNSLYLGIITHAILEKAFKQKGSHYYELSLEDIQHQLTPYF
ELWKELDKSHVEDIDLMENKLASNIHFSLQYLKGYEEKHDFIKPIASEQEFHINLFDGLE
LIGKIDRIDQDQRNQDYYLYDYKSSEHRIDKYKYLSGQQIQLMTYKLVLEKDGDKKVRAT
YYFSLSPQKQKLDYLQYKFNRRSVEKEAEDVYEGDFLRPTFLHNQSLSGWKLDDDFSDYN
KNTLNSKSFKITNDDFNEVTLRLLMNFYEQLKKGTIERKPQDCTFCSYKRICSYRNGATE
THIPDSVSELLEKQQEDKQ
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatagtagccaatgcccctctccagcaacaactttatcaccggtatttcaaa
gaaaaaaatggtctagtcagtggtgtgcaaatcgctccactttcttcttacttaaaccaa
gatttccaagacccactcatttttatgtggtctatccaagcggaattaaggaaagcggat
ttttctttattcccaagctacgcaggtatgctacaatacccttcttttgttcaagaagtg
attcactttgcgaaagattgcattgcctttggtattcaaaaaaaagacttaccggaaaat
gacaagcttgaaaaagaattaaaagaactgattggtcttgttttacaatcatctttattg
gatgcttatcgtaatgcaattgaacaaaataaacaattagacctttcttctttagaagta
aaagatattgttttagaagatgattaccatagtcacttattaaaagggaaactaccttct
aggtcttttttccaagaaactatttctgatttaagaaccgctttaaatattcgccaagaa
atggaagtgatggcacaagaaatctgttcttttaaaggaagtgtcaatatcgtattatct
caatattcttcccaatttcctattttaaaacaagtctttcatcgttatggcattcctttt
tccgcttatcaacaagaacaaccgagccttgtcggaaggatttttaaagatttattctta
gtggcttaccaacaagatgtgaaggctttcttagatttaattgaaaataatgcctttcat
cattctttaagcaaagacgagcaaaatgtattatcaaaatatcttagcaaggttgaaccg
gaatcccccaaattaccaattcaaagcatggaagaattatggtccgatgaagcgaaagct
tatgctcgctatcaagagcgaatcaatgctttttatcttgctattcaagaaaacctttct
actcttttacaagccggtaccatcgttgataaactcaaacaaagctatgatgttttcata
accctaccctttcttaaaaaccttcaggaacaaaaacttgcctcttcattggaatccttc
ttaaatcaaattggtgatcaagtggatgaagacaacttgccattctttttggaactattg
gatcacttcaaatccttttgtttaccaagtgaaattggaccaatcatggtaacggattta
cgccatcctgttttacaggcggaactttcttacatcattggtttgaatagtgatgcatat
cctaatatccctaataaatcaggtattttcaatgaggattattacgctcaactttcttat
ccaagctatgaagaacgctatgaaacttacctttcacaattaagttggatctttcattcc
ggtaaacaaattcacttctcctattcccaaaaggattatgaaggtaaaaaactagaagct
tcttatgccattcaaagtttattcacaaagaaaagccaaatcatcaaagccaaggaatta
ctaccaagaaaaaccaatcaacatgaagaaaacttatccccttcttttatgcaagaatgg
tttacccaaaacccggtggtgaaaggttccgtcagttccattgaagaatggtatcgttgt
ccttatcaatacttcttaagtcgtcttttaaaaatacaagaacaaagttcttttgaaccc
aatagtttatacctcggcatcatcacccatgctattttagaaaaggcttttaagcaaaaa
ggaagtcattattatgaattaagcttagaagatatccaacatcaattgactccttatttt
gagctttggaaagagttagacaaatcccatgttgaagacattgatttaatggaaaataag
ttagcttctaacattcacttctctttacaatacttaaaaggatatgaagaaaaacatgat
ttcattaagccaatcgccagtgagcaggagttccatatcaatctttttgatggtttagag
ctaatcggtaaaattgaccgtattgaccaagatcaacgtaaccaagattactacctatat
gactacaaatcttcagaacataggattgataaatacaaatacttatctggtcaacaaatt
caactcatgacttataaattagttttagaaaaagatggagataaaaaagttcgggctacg
tattatttcagtctttcacctcagaaacaaaaattagactatcttcaatataaatttaat
cgaagaagcgtggaaaaagaggcagaagatgtttacgagggtgattttcttcgtcctaca
ttccttcataatcaatctcttagtggttggaaattagatgatgatttttctgattacaac
aagaatacactcaatagtaaaagctttaaaattaccaacgatgatttcaatgaagtcact
ttgcgtttgttaatgaacttttatgaacaactcaagaaaggcaccattgaaagaaaacct
caggattgtacattctgttcctataagagaatttgttcctatagaaatggagccaccgaa
acacacattcctgattcagtgtctgaattattagaaaagcaacaggaggacaagcaatga
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