Burkholderia sp. PAMC 26561: AXG89_00055
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Entry
AXG89_00055 CDS
T05481
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bum
Burkholderia sp. PAMC 26561
Pathway
bum03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AXG89_00055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bum03400
]
AXG89_00055
DNA repair and recombination proteins [BR:
bum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AXG89_00055
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AXG89_00055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
DUF6827
Kinesin
UB2H
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AME22457
LinkDB
All DBs
Position
1:complement(6875..8956)
Genome browser
AA seq
693 aa
AA seq
DB search
MSDTPLVEAAETLDESKFITFEGSPFQLYQPYPPAGDQPTAIATLVEGIEDGLSFQTLLG
VTGSGKTFTMANVIARMGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPE
AYVPQRDLFIEKDSSINEHIEQMRLSATKSLLERRDVVIVATVSAIYGIGNPSEYHKMIL
TLRTGDKMGQRDIIARLIAMQYNRNEADFSRGSFRVRGDTIDIFPAEHAEMAVRVELFDD
EIESMQLFDPLTGRVRNKIPRFTVYPSSHYVTPRDTVMRAIETIKTELRERLEFFHKDGK
LVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGAAPGEPPPTLVDYLPPDALMLLDE
SHVLIGQLNGMYNGDRARKENLVDYGFRMPSALDNRPLKFNEFERKMRQAVFVSATPADY
ENRTSGQVAEQLVRPTGLVDPEIEVRPARSQVDDVLAEINERVKVHERVLVTVLTKRMAE
QLTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLGSFDVLVGINLLREGLDIPEVSLVAI
LDADKEGFLRAERSLIQTIGRAARNVNGKAILYGDNITVSMKRAIGETERRRTKQIAHNL
AMGITPRGVTKRIKDIIDGVYNVDDARAELKEAQTRAKFEDMSEKQISKEIKRLEKQMMD
HAKNLEFEKAAQTRDQLSLLRQRVFGANVSDHP
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtccgataccccgctagtagaagccgcagaaacgctcgatgaatcgaagttcatcacc
ttcgagggctcgccgttccagctttatcaaccgtatccgccagctggcgaccagccgaca
gcgatcgcgacgctcgtcgaggggatcgaggacggcctgtcgttccagacgctgctcggc
gtgaccggttccggcaagactttcaccatggcgaacgtgatcgcgcgcatgggccgtccg
gctatcgtgtttgcgcccaacaagacgctcgccgcgcagttgtatgcggagtttcgtgag
tttttcccgcgtaatgctgtcgaatatttcgtttcctactacgattattaccagcccgaa
gcctacgtcccgcagcgggatttgttcatcgagaaagattcgtcgatcaacgagcatatc
gagcaaatgcggctttcagccacaaaaagcctgctggagcggcgcgatgtggtgatcgta
gcgacggtgtcggccatttacggtatcggcaacccgtcggaatatcacaagatgattctg
acgctgcgcacgggcgacaagatggggcagcgcgacatcatcgcgcggctgatcgcgatg
cagtacaaccggaacgaagcggatttttcgcgtggcagcttccgcgtgcgcggcgacacc
atcgacattttcccggccgagcatgccgaaatggccgtgcgagtcgagcttttcgacgat
gaaatcgagtcgatgcagctcttcgatccgctcaccggccgcgtgcgcaacaagattccg
cgtttcaccgtgtatccgtcgtcccattacgtgacgccgcgggacacggtaatgcgcgcc
atcgagacgatcaagactgaattgcgtgagcgcctcgagtttttccacaaggacggcaag
ctggtggaagcgcagcggctcgagcaacgcacgcgttttgacctggagatgctgcaggaa
ctggggttttgcaaaggcatcgagaactactcgcggcatttctcgggcgcggctcccggc
gaaccgccgcccacgctcgtcgattatttgccgcccgacgcgctgatgctgctcgacgag
tcgcacgtgctgatcggccagttgaacggcatgtacaacggtgaccgggcgcgcaaggag
aatctggtcgattacggcttccggatgccgtcggcgctggataaccggccgctgaaattc
aacgagttcgaacgcaagatgcgccaggcggtttttgtctcggcgacaccggccgattac
gaaaaccggacgtcagggcaggtcgccgaacagctcgtacggccgaccgggctggtcgac
cccgagatcgaggtacgtccggcccgctcgcaagtggacgacgtgcttgccgagatcaac
gagcgtgtcaaagtgcacgaacgggtgctcgtcacggtgctgaccaaacgcatggccgaa
caactcaccgaattcctggcggatcacggtgtgaaagtgcgctatctgcacagcgatatc
gatacggtcgagcgcgtggaaatcatccgcgatttgcgcctggggtctttcgatgtgctc
gtcgggatcaacttgctgcgggaagggctggatattccggaagtgtcattggtcgcgatt
ctcgacgctgacaaggaaggtttcctgcgtgccgagcgctcgctgattcagacgatcggc
cgggctgcccggaatgtgaacggcaaggcgatcctttacggcgacaacatcacggtttcc
atgaaacgcgcgattggcgagacggaacgccggcgcacgaagcagatcgcgcacaacctc
gcgatgggcattacgccgcgcggcgtgacgaagcggatcaaggacatcatcgacggcgtg
tacaacgtcgacgacgctcgcgccgagctgaaggaagcgcagacgcgtgcgaagttcgag
gacatgtcggaaaagcagatttcgaaggaaatcaagcgcctcgaaaagcagatgatggat
cacgcgaaaaacctcgaattcgagaaagcggcgcagacgcgcgaccaactgtcgctgctg
cgtcagcgtgttttcggcgcgaacgtgagcgaccatccataa
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