Burkholderia sp. PAMC 26561: AXG89_00545
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Entry
AXG89_00545 CDS
T05481
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bum
Burkholderia sp. PAMC 26561
Pathway
bum03420
Nucleotide excision repair
bum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AXG89_00545
03430 Mismatch repair
AXG89_00545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bum03400
]
AXG89_00545
Enzymes [BR:
bum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AXG89_00545
DNA repair and recombination proteins [BR:
bum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AXG89_00545
MMR (mismatch excision repair)
Other MMR factors
AXG89_00545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AME22540
LinkDB
All DBs
Position
1:complement(106969..109338)
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AA seq
789 aa
AA seq
DB search
MPDLLANLNPEQLAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGYASPQTILAVTF
TNKAAKEMMARLTAMMPIDTRGMWIGTFHGLCNRMLRAHFRDAGLPQAFQILDTADQLSA
IKRLMKGLNIDDEKYPAKNLQYFINNAKEQGLRPKDVDATDAFNMKFVELYAAYEQQCQR
EGVVDFPELLLRCYELLAHNPPLRAHYQARFRNILVDEFQDTNKLQYAWLKILAGEHNAI
FAVGDDDQSIYAFRGANVGNMHDFEREFHVRNMIKLEQNYRSHGHILDTANFLIAKNSRR
LGKNLRTDAGHGEPVRVYEAATDTQEAGWIVEEIKALIHAGAARGEIAILYRSNAQSRTI
EHTLVNAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFSRVVNFPTRGIGARSI
EQLADAARLYNCSMAAAVPYVAGKAGSSLANFAQLIGKIRAETQHMSLPETVEYVVRASG
LATHYENEREGQDRLENLQEVVNAAAAFVQEEGYGLDTPARSIPLRPGATNAPEIGVATD
DPAVDVLDPESPADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLE
FMAVFITGLEEGLFPHENSAQESDGLEEERRLAYVAITRAKERLYLSFAQSRMLHGQTRY
NIRSRFFDELPEESLKWLTPKVEAGARWGGRADNAGWGRDWFARPGQERGERAAYTDPDA
GKPLPAFANNQRAADTGFKIGQPVFHNKFGEGTVIALEGAGTDAKAQVRFKRHGEKWLAL
AVAKLQAVE
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatttgcttgccaatctgaaccccgaacaacttgccgccgtcacgttgccaaac
gagccggcgcttatcctggcgggcgcgggcagcggcaagacgcgcgtcctgatcacgcgc
atcgcgtggctgatccagcagggttatgcgtcgccgcagaccattctcgcggtcacgttc
acgaacaaggccgcaaaagagatgatggcgcggctgacggccatgatgcccatcgataca
cgcggcatgtggatcggcaccttccacggcttgtgcaaccgcatgctgcgcgcgcatttc
cgcgatgccggcctgccgcaggcattccagatcctcgatactgcagaccagctttcggcc
atcaagcggctgatgaagggcctgaatatcgacgacgaaaaatatccggccaagaatctc
cagtacttcatcaacaacgcgaaggaacaagggctgcgtccgaaagacgtcgacgcgacc
gacgccttcaacatgaagttcgtcgagttgtacgcggcgtacgagcagcaatgccagcgc
gaaggcgtggtggatttccccgagctcctgctgcgctgctacgagctgctcgcgcacaat
ccgccgctgcgcgcgcattaccaggcgcgttttcgcaatattctggtcgacgagttccag
gatacgaacaagctgcagtacgcgtggctcaagatactggcgggcgagcataacgccatc
ttcgccgtgggcgacgacgaccagtccatctacgcattccgtggcgcgaacgtcggcaac
atgcatgacttcgagcgcgaattccatgtgcgcaacatgatcaagctggagcagaactat
cgctcgcatggtcatattctcgataccgccaacttcctgatcgcgaaaaactcgcgccgg
ctcggcaaaaatctgcgcaccgatgcaggtcacggcgaacccgtgcgcgtgtacgaggcc
gcgaccgatacgcaggaagccgggtggatcgtcgaggagatcaaggcgctgattcatgca
ggcgcggcgcgtggcgagatcgcgatcctgtatagaagcaatgcgcagtcgcgaaccatc
gaacatacgctggtgaatgcgggcattgcgtatcgcgtgtatggcggcttgcggtttttc
gagcgccaggaagtgaagcacgcgcttgcgtatctgcgcctgatcgacaaccccaacgac
gacaccgcgttttcccgcgtcgtgaatttcccgacgcgtggaattggcgcaaggtcgatc
gaacaactcgccgacgccgcccgtctctacaactgttcaatggccgcggccgtgccctac
gtggccggcaaggcaggttcgagtctcgcgaatttcgcgcagttgatcggcaagattcgc
gccgaaacacagcacatgagcttgccggaaacggtggagtacgtggtccgcgcgagcggt
ctcgcgacgcattacgagaatgaacgcgaaggccaggaccggctcgagaacttgcaggaa
gtggtgaacgcggcggctgcattcgtgcaggaagaaggctacgggctcgatacccccgcg
cgttccattccgctgcgcccgggcgcgaccaacgcgccggaaatcggcgtggcgacggat
gatcccgctgtcgatgtgctcgatcccgaaagtcccgccgatcctgcgcaaaaccccgac
accatgacgccgctggcgggtttcctgtcgcatgcatcgctggaagccggcgacaaccag
gcgcaagccggccaggacgccgtgcagttgatgacggtgcacgcagccaaggggctggag
ttcatggccgtgttcatcacggggctcgaagagggtttgttcccgcacgagaacagcgcg
caggaaagcgacgggctcgaagaggaacggcgtctcgcgtatgtggcgatcacgcgggcg
aaggagcggttgtatctgtcgtttgcccagagccggatgttgcacggccagacgcgctac
aacatccgctcccgtttcttcgatgagcttccggaagagtcgctcaaatggctcacgccc
aaagtggaagcaggcgcgcgctggggcggccgggccgataacgccggctggggccgggac
tggttcgcgcgtccggggcaggaacgcggagaacgcgccgcttacacggacccggatgcc
ggcaagccgttgcccgcgttcgccaacaaccagcgcgcggctgacaccggattcaagatc
ggccagcccgtgttccacaacaagttcggcgagggcacggtgatcgcgctggaaggagca
gggacggacgcgaaagcccaggtccggttcaaacgccatggcgagaaatggctcgcgttg
gcggtggctaaactgcaggcagtggaatga
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