Burkholderia sp. PAMC 26561: AXG89_00875
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Entry
AXG89_00875 CDS
T05481
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bum
Burkholderia sp. PAMC 26561
Pathway
bum03030
DNA replication
bum03430
Mismatch repair
bum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AXG89_00875
03430 Mismatch repair
AXG89_00875
03440 Homologous recombination
AXG89_00875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bum03032
]
AXG89_00875
03400 DNA repair and recombination proteins [BR:
bum03400
]
AXG89_00875
Enzymes [BR:
bum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AXG89_00875
DNA replication proteins [BR:
bum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AXG89_00875
DNA repair and recombination proteins [BR:
bum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AXG89_00875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AME22597
LinkDB
All DBs
Position
1:178043..178780
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AA seq
245 aa
AA seq
DB search
MRQLVLDTETTGLNARTGDRIIEIGCVELVNRRLTGNNLHFYVNPGRDSDPGALAVHGLT
TEFLSDKPKFADIAHELRDFVAGAELIIHNAPFDVGFMDVEFALLGMPCVKEVCGGVIDT
LVNAKQMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQESLVIDML
GEMPTSGPGHAPRIALDDLQLPVLLASEEELSAHLAALDDLDKAVKGTSVWRIETVVGVE
VSAAP
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaactcgtactcgacaccgaaacaaccggcctcaacgcccgcacgggcgaccgt
attattgaaattggctgcgtcgagcttgtgaatcgacggctgaccggtaacaacctgcac
ttctacgtgaatccggggcgcgacagcgatccgggcgcgctcgcggtgcacggcctcact
acggaatttctcagcgataaacccaagttcgcggacatcgcgcatgagctgcgcgacttc
gtggcaggcgccgagctgatcatccataacgcaccgttcgacgttggtttcatggacgtc
gagttcgcccttctcggcatgccttgcgtgaaggaagtctgcggcggcgtgatcgacaca
ctggtgaacgcgaagcagatgttccccggcaagcgcaattcgctcgatgcattgtgcgac
cggtttggcatcagcaacgcgcaccggacgctgcatggcgccctgctcgactcggagttg
ctcgcggaagtttatctggcgatgacgcgcggtcaggaaagcctcgtcatcgacatgctt
ggcgaaatgccgacgtccgggccgggtcatgcgccgcgtatcgcgctggatgatctgcag
ttgccggtgctgctcgcatcggaggaagaactgagtgcgcatctcgccgcactcgatgac
ctggacaaagcagtcaaagggaccagcgtttggagaatcgaaacggttgttggtgtcgag
gtttcggcggcgccttga
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