Burkholderia sp. PAMC 26561: AXG89_04175
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Entry
AXG89_04175 CDS
T05481
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bum
Burkholderia sp. PAMC 26561
Pathway
bum00300
Lysine biosynthesis
bum00470
D-Amino acid metabolism
bum01100
Metabolic pathways
bum01110
Biosynthesis of secondary metabolites
bum01120
Microbial metabolism in diverse environments
bum01230
Biosynthesis of amino acids
Module
bum_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bum00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AXG89_04175
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AXG89_04175
Enzymes [BR:
bum01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AXG89_04175
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Paralog
Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AME23149
UniProt:
A0A0X8L3C8
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All DBs
Position
1:902584..903846
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AA seq
420 aa
AA seq
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MTQSVFSRADGVLQVEGVSAASLAEQFGTPLYVYSRSALTDAYQAYADACKGRRATIHVA
VKANSNLAVLNVFARLGAGFDIVSSGELARVLAAGGKAENTVFSGVGKSVWEMREALDAG
VKCFNVESIPELHALNEVAGSAGKKAPVSLRVNPDVDAKTHPYISTGLKSNKFGVAFSDA
RATYAQAAAMSNLNVIGIDCHIGSQITEVSPYLDAVDKLLDLVEQIEADGTKIHHIDVGG
GLGITYDDETPPAIGEFVKAVLAHIEKRGHGEREVYFEPGRSLVGNAGLLLTRVEYLKPG
AEKNFAIVDAAMNDLARPAMYQAFHRIEAVGTSAAKAELYDVVGPVCESGDWLGKDRSLA
IEQGDLLAIFSAGAYGFVMSSNYNTRPRAAEVMVDHERARLVREREEVKDLFAGESIFPD
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgacccaatccgtattctcgcgcgccgatggcgtgcttcaagtcgaaggcgtttcggcg
gcatcgttagccgaacagttcggcacgccgctgtacgtgtactcgcgcagcgcgctgacc
gacgcctatcaagcttacgccgatgcgtgcaaaggccgccgcgccaccatccacgtcgcg
gtgaaagcgaacagcaatctggccgtgctgaacgtgttcgcgcgtttgggcgcgggcttc
gacatcgtctcgtcgggagaactggcgcgcgtgcttgcagcgggcggcaaggcggaaaac
accgtgttttcgggcgtgggcaagtcggtgtgggaaatgcgtgaagcgctcgatgccggc
gtcaaatgcttcaacgtcgagtcgattcctgagctgcacgcactcaacgaagtcgccggg
tcggccggcaagaaggcgccggtttcgttgcgcgtaaatcccgatgtcgacgcaaagacg
catccgtatatctccacgggtctcaagtcgaacaagttcggcgtagcgttcagcgatgca
cgcgcgacctacgcgcaagccgcagccatgtcgaacctgaatgtcattggcatcgattgc
catatcggttcgcagatcacggaagtgagtccgtacctcgacgccgtcgacaagctgctt
gatctcgtcgagcagatcgaagcagacgggacgaagatccatcacatcgatgtcggcggt
ggactcggcatcacctacgacgacgagacgccgcctgccatcggtgaattcgtgaaagcg
gtgctcgcgcatatcgagaagcgcggacatggcgagcgtgaagtgtatttcgagccggga
cgttcgctggttggcaacgcgggcctgttgctcacgcgcgtggaatatctgaagccgggt
gcggagaaaaactttgctatcgtcgatgccgccatgaacgacctcgcgcgtcccgcaatg
tatcaggcgtttcaccgcattgaagcggtgggaacgagcgcggcgaaggccgaactctac
gacgtggtcggtcccgtgtgtgaaagcggcgactggttggggaaggaccgctcgcttgcc
atcgaacaaggcgatctgcttgcgatcttctcggccggcgcgtacgggttcgtcatgagc
tcgaactacaacacgcgcccgcgcgcggccgaagtgatggtcgatcacgaacgcgcgcgt
ctcgtgcgtgaacgtgaagaagtgaaggatctgttcgccggggaatcgatctttccggat
tga
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