Burkholderia sp. PAMC 26561: AXG89_04390
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Entry
AXG89_04390 CDS
T05481
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bum
Burkholderia sp. PAMC 26561
Pathway
bum03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bum00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AXG89_04390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bum03021
]
AXG89_04390
03400 DNA repair and recombination proteins [BR:
bum03400
]
AXG89_04390
Enzymes [BR:
bum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AXG89_04390
Transcription machinery [BR:
bum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AXG89_04390
DNA repair and recombination proteins [BR:
bum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AXG89_04390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Baculo_ME53
ApbA_C
Motif
Other DBs
NCBI-ProteinID:
AME23191
UniProt:
A0A0X8L3J0
LinkDB
All DBs
Position
1:complement(936248..940495)
Genome browser
AA seq
1415 aa
AA seq
DB search
MKALLDLFKQVQQPEVFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVIEPGMTPLKARQIMTEEDYYNKVEEYGDEFRAEM
GAEGVRELLRAINIDEQVEVLRTELKNTGSEAKIKKYAKRLKVLEAFQRSGIKPDWMVLE
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQCGLPKLMALELFKPFIFNKLEVMGVATTIKAAKKEVENQTAVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLFPANGDPSIVPSQDIVLGLYYASREAVNGKGEGMTFTGVSEAIRAYENK
EVELASRVNVRITENIHNPDQSEGAPKFVPKITLYATTVGRSILSEILPPGLPFSVLNRP
LKKKEISRLINTAFRKCGLRETVIFADQLMQMGFRLATRAGISICVDDMLVPPQKEQIVG
DAAKKVKEYDRQYMSGLVTSQERYNNVVDIWSATSEAVGKAMMEQLATEPVVDRDGNQTK
QESFNSIYMMADSGARGSAVQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTTNGVAMKALVEGGEVVEAL
RDRILGRVAVADVVNPETQETLFESGSLLDEDAVDEIERLGIDEVRVRTPLTCETRYGLC
ASCYGRDLGRGSRVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAIASSVEAKSN
GTVRFTATMRYVTNAKGEQIVISRSGEAIIADDLGRERERHKIPYGATLLQLDGVQIKAG
AQLAQWDPLTRPIITEWGGTVKFENVEEGVTVAKQIDDVTGLSTLVVIDVKRRGSQASKS
VRPQVKLLDAQGEEVKIPNTEHSVQIGFQVGALITVKDGQQVQVGEVLARIPVEAQKTRD
ITGGLPRVAELFEARSPKDAGILAEVTGTTSFGKDTKGKQRLVITDVEGEQHEFLITKEK
QVLVHDGQVVNKGEMIVDGPADPHDILRLQGIEALARYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQIVDNGDTRFIMGEQVERSDMLDENDRMAAEGKIPATYENVLLGITKASL
STDSFISAASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAFHKARKSREL
SDRQRFDQIAAEESFEFGTPEAAPVVPAEQQHPAE
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctctgctcgatctattcaagcaagtccaacaacctgaagtattcgacgcgatc
aagatcggtctggcctcgccggacaagattcgctcgtggtccttcggcgaagtgaagaag
cctgaaaccatcaactaccggaccttcaagccggaacgcgatggtctgttctgcgccaag
atttttggcccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcac
cgtggcgtgatctgcgaaaagtgcggcgtcgaagtgacgctcgccaaggtgcgtcgcgaa
cggatgggccacattgaactggcctcgccggttgcgcacatctggttcttgaaatcgttg
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgatatcgaacgcgtgctgtat
ttcgaagcgtacgtggtgatcgaaccgggcatgacgccgctgaaagcgcggcagatcatg
acggaagaggattactacaacaaggttgaagaatacggcgacgaattccgtgccgagatg
ggcgcggaaggcgtgcgtgaactgctgcgcgcaatcaacatcgacgaacaggtcgaagtg
ctgcgcaccgaactcaagaacacgggttcggaagcgaagatcaagaagtacgcgaagcgc
ctgaaagtgctcgaggcattccagcgttcgggcatcaagccggactggatggtgctggaa
gtgctgccggtgctgccgccggaactgcgtccgctcgtgccgctcgacggcggccgtttc
gctacgtcggacctgaacgacttgtatcgccgcgtgatcaaccgtaacaaccggttgaag
cgtctgctcgaattgaaggcgcctgagatcatcgtccgcaacgaaaagcggatgctgcag
gaagccgtcgattcactgctcgacaatggtcgtcgcggtaaggcaatgaccggcgcgaac
aagcgtccgctgaagtcgctcgctgacatgatcaagggtaagggcggtcgtttccgtcag
aacttgctcggtaagcgcgttgactattcgggccgttcggtgatcgtggtgggtccgacg
ctcaagctgcatcagtgcggattgccgaagctgatggcgctcgaactgttcaagcctttc
atcttcaacaagctggaagtgatgggtgttgctaccaccatcaaggccgcgaagaaggaa
gtcgagaaccagacagccgtggtgtgggacattctcgaagaagtcattcgtgaacatccg
gtcatgctgaaccgtgcgcctacgcttcaccgtctcggcattcaggctttcgagccggtg
ctgatcgaaggcaaagctatccagttgcatccgctcgtttgcgcggcgttcaacgccgac
ttcgacggtgaccagatggccgttcacgtgccgctgtcgctggaagcgcagatggaagcg
cgcacgctgatgctggcgtcgaacaacgtcctgttcccggccaacggcgatccgtcgatc
gtgccgtcgcaggatatcgtgctgggtctttactacgcatcgcgtgaagcggtgaatggc
aagggcgaaggcatgacgttcaccggcgtgtcggaagcgattcgcgcgtacgaaaacaag
gaagtcgagctggcgtcgcgggtgaatgtccggattacggaaaacattcacaacccggac
caaagcgaaggcgcaccgaagttcgtgccgaagatcacgctgtacgcaaccaccgttggc
cgttccatcctgtcggagatcctgccgccaggactgccgttctcggtgctgaaccgtccg
ctgaagaagaaggaaatttcgcgcctgatcaacacggcattccgcaagtgcggtctgcgc
gaaacggtgatcttcgccgaccagttgatgcagatgggtttccgtctggctacgcgcgcc
ggtatttcgatttgcgtcgacgacatgctcgtgccgccgcaaaaagaacagatcgtcggc
gatgcagccaagaaggtgaaggaatacgaccgtcagtacatgtcgggtctcgtcacctcg
caagagcgctacaacaacgtggtcgacatctggtcggcaacgtcggaagcggtcggcaag
gcgatgatggagcagttggctacggaacccgtggtcgaccgcgacggtaatcaaacgaag
caggaatcgttcaactcgatctacatgatggccgattcgggcgcgcgtggatcggcagtt
cagattcgtcagctggccggtatgcgtggcctgatggcgaagccggacggctcgatcatc
gagacgcctatcacggcgaacttccgtgaaggcctgaacgtgttgcagtacttcatctcg
acgcacggtgcacgtaaaggcctggccgatacggcgttgaagacggcgaactcgggttac
ctgacgcgtcgtctcgttgacgtgacgcaggatctggtcgtggtcgaagacgattgcggc
acgacgaacggcgtggccatgaaggcgctggttgaaggtggtgaagtcgtcgaagccttg
cgtgaccggattctgggtcgcgtggcggtggctgacgtcgtcaacccggaaacgcaggaa
acgctgtttgaatcgggttcgttgctggacgaagatgcggtcgacgaaatcgaacgcctg
ggtatcgacgaagtgcgcgtgcgcacaccgttgacctgcgaaacgcgttacggcctgtgc
gcttcgtgctacggccgcgacctgggtcgtggctcgcgcgtgaacgtcggcgaagcggtt
ggtgtgatcgctgcgcagtcgatcggtgagccgggcacgcagttgaccatgcgtacgttc
cacatcggtggcgcggcgtcgcgtgcggcgatcgcttcgtcggtggaagcgaagtcgaac
ggtacggtgcgtttcacggcaacaatgcgttacgtcacgaatgcgaagggcgagcagatc
gtcatctcgcgttcgggcgaggcgatcattgccgacgacctcggtcgtgagcgtgaacgt
cacaaaatcccgtacggcgcaacgctgctgcaactcgacggcgtccagatcaaggccggt
gcacaactggctcaatgggatccgttgacccgtccgatcatcaccgagtggggcggtacg
gtgaagttcgaaaacgtcgaagaaggcgtgacggtagccaagcagatcgacgatgtgacg
gggctttcaacgctcgtcgtgatcgacgtgaagcgtcgtggttcgcaggcgtcgaagagt
gttcgtccgcaagtgaagctgctcgatgcacaaggcgaagaagtcaagatcccgaacacc
gagcattcggtgcagatcggcttccaggttggcgcactgatcaccgtgaaggatggtcag
caagtgcaggtcggtgaagtgctggcacgtatcccggttgaagcgcagaagacgcgtgac
attaccggtggtctgccgcgcgtggccgagttgttcgaagcgcgctcgccgaaggacgcc
ggcattctggcggaagtcacgggtacgacgtcgttcggtaaggacacgaagggcaagcag
cgtctcgtcattaccgacgtggaaggggaacagcatgagttcctgatcacgaaggaaaag
caggtgctggtgcatgatggtcaggtcgtcaacaagggcgaaatgatcgtcgacggcccg
gcggatccgcacgacatcttgcgtttgcagggtatcgaggcgctggcgcgttacatcgtg
gacgaagtgcaggacgtgtaccgtctgcagggcgtgaagatcaacgacaagcacatcgaa
gtgatcgtgcgtcagatgttgcgtcgtgtgcagatcgtcgacaacggcgatacgcgtttc
atcatgggcgaacaagtcgagcgttcggacatgctggacgagaacgaccggatggccgcg
gaaggcaagatccccgcgacctacgagaacgtgctgctgggtattacgaaggcatcgctc
tcgaccgattcgttcatctcggccgcttccttccaggaaacgacgcgcgtgctgaccgaa
gccgcaatcatgggcaagcgcgacgatctgcgcggtctgaaggaaaacgtgatcgtcggc
cgtctgattccggccggtacgggtctcgcgttccacaaggcacgcaagagccgcgagctg
tcggatcgtcaacgtttcgaccagatcgcagcggaagaatcgttcgagttcggtacgccc
gaagcagcaccggttgtacctgctgaacagcagcatccggcggaataa
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integrated database retrieval system
