Burkholderia sp. PAMC 26561: AXG89_05405
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Entry
AXG89_05405 CDS
T05481
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K02405
RNA polymerase sigma factor FliA
Organism
bum
Burkholderia sp. PAMC 26561
Pathway
bum02020
Two-component system
bum02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bum00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AXG89_05405
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AXG89_05405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bum03021
]
AXG89_05405
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bum02035
]
AXG89_05405
Transcription machinery [BR:
bum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AXG89_05405
Bacterial motility proteins [BR:
bum02035
]
Flagellar system
Flagellar assembly proteins
Stator
AXG89_05405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HopW1-1
UPF0122
CT_C_D
Motif
Other DBs
NCBI-ProteinID:
AME23360
LinkDB
All DBs
Position
1:1144159..1144890
Genome browser
AA seq
243 aa
AA seq
DB search
MYNAQGKLSQAEVLTRYAPLVRRLGLQLVAKMPASVDLDDLIQAGMIGLLDAASRYKEDQ
GAQFETYASQRIRGAMLDELRANDWLPRSMRKTSREVESAVHKVEQHLGRSASEQEVAEH
LNMPLDEYQTMLQDLHGSQLIYYEDFDRSSDDEPFLDRYCVDKADPLSALLDGSLRSALV
EAIDKLPEREKLLMSLYYEKGLNLREIGAVMEVSESRVCQLHSQAVARLRAKLREQAWSG
VEA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtataacgcccagggaaaactgtcacaagccgaggtcctgacccgctacgcgccgctc
gtgcgccggctgggtctgcaactggtcgcgaaaatgccggccagtgtggatctcgacgat
ctgatccaggcaggcatgatcggtctgctcgacgccgccagccgctacaaggaagaccag
ggcgcgcagttcgagacatacgcgagccagcggattcgtggcgcaatgctcgacgaactg
cgcgccaacgactggctgccgcgcagcatgcgcaagacgtcgcgcgaggtcgaatcggcg
gtacacaaggtcgagcagcaccttggccggtcggcgagcgaacaggaagtcgccgagcac
ctcaacatgccgctcgacgaataccagaccatgctgcaggatctgcacggcagccagttg
atctattacgaagacttcgaccggtcatcggatgacgaaccattcctcgatcgttattgc
gtcgataaagccgatccgttgtccgcattgctcgacggcagtttgcgttccgcgctggtc
gaagccatcgacaaactgcccgagcgcgaaaagctgctgatgagcctctattacgagaag
ggcttgaatctgcgtgaaatcggcgcagtgatggaagtcagcgaatcgcgcgtgtgccag
ttgcatagccaggcggttgcgcggttgcgcgcgaagttgcgcgaacaggcctggtcgggc
gtggaggcttga
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