Burkholderia sp. PAMC 26561: AXG89_05920
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Entry
AXG89_05920 CDS
T05481
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bum
Burkholderia sp. PAMC 26561
Brite
KEGG Orthology (KO) [BR:
bum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bum03400
]
AXG89_05920
DNA repair and recombination proteins [BR:
bum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AXG89_05920
Archaeal homologous recombinant proteins
AXG89_05920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_15
ABC_tran
nSTAND3
cobW
AAA_21
AAA_22
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AME23447
LinkDB
All DBs
Position
1:complement(1263218..1266655)
Genome browser
AA seq
1145 aa
AA seq
DB search
MKILSLRLRNLNSLKGEWKIDFSQPPFRDNGLFAITGPTGAGKTTLLDAICLALYHRTPR
MDTVSQGTNELMTRHTFECLAEVEFEVKGEGYRAFWSQRRARDKTDGNLQAPKVELARLD
GTILTERIVDKLRKVEEITGLDFGRFTKSMMLAQGGFAAFLEAKANERAELLEELTGTDI
YGTISQHVFERTRDEKLALDTLLVRADGVQLLTEEERNAKQQEVIALAAQEITLGKQAES
TRAMHAWRVALSDAEKQLEQASLNQQQADAKIADAKPLLDRLAASAPAEKLRADHTAMLS
ARERHAETLRQAAAARNEKQAAALDAARGLRLASVMGTRVAQLRELGLTTVSAEIKSIQS
TLDQHPHRSKLGEQIVLWQHQFDARQQTLNDIELIRTKHVGLRASIEKQAGDISAKLKAM
SNAMGAAELARKTEREQLEKLSSMHSGESEADLKTRCQRLQDQHYLFGKLVEVGEAVTRG
TRQLATDREELAKRNAASVLLADQHERLVKDIEMLTEQVQDKRKLLDQERRILDLAGHRA
ALQPDEACPLCGSTEHPSIDVYQTLDVSSTEHALKEKDTALRGKGKELLAANVAIAESNA
SVSALKKRIDTWLQDDKGHAESWQMLCAELGLETVDRDALSALVQQHTAKLKSAQETLAA
VDQQKIVIHQHATAANAAERFALEQQHALKMSEERQNADEKSLKEMADQAEALQTTLLKK
ERTLDESVISAGHARPDSWTQCQAWLAERDNEWKAWQKASERVRALNQQADRLKQSLETA
STDAAKWCVRWTACEKDFPELQADPIAATDDPDAAFISAIHRYETARDKTSSLEGTERTM
ATRLSEEQAHAEKTSAAWLNALTRSVFADEQSFLSALLSHEERDRLQTQKRELDELSTTV
RTLRANAENRRAELLKDPKTDQDAEALNRMLEDLAASIKMLSQQQGGLRATLQGDDKRRV
EQQALYRQIDTQRAQYDLWQRLSSLIGSADGAKYRKFAQGLTLDHLIYLANRQLMQLHGR
YQLNRKLAGELEMEVLDLWQGDIARDTRTLSGGESFLVSLALALALSDLVSFKTSIDSLF
LDEGFGTLDGETLEIALNALDSLNASGKMIGVISHVEALKERIPLQIKVAKSVGIGFSTV
EVVGA
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttgtcgttgcgtttgcgtaatctgaattcgctcaagggcgagtggaagatc
gatttcagccagccgccgtttcgcgataacggcctgttcgccatcaccggtccgaccgga
gccggcaagacaaccttgctcgatgccatctgtctcgcgctctatcaccgcacgccgcgc
atggatacggtctcgcaaggcacgaacgagctgatgacgcgccacacgttcgaatgcctc
gcggaagtcgagttcgaagtgaagggcgaagggtatcgtgcattctggagtcagcgacgc
gcacgcgataaaaccgacggcaatctgcaggcgccaaaggtcgaactcgcgcggctggac
gggacgatcctgacggagcgcattgtcgataaactgcgcaaggtcgaagagatcacgggg
ctggatttcggccgcttcaccaaatcgatgatgctcgcccaaggcggtttcgccgcgttc
ctggaagcgaaggcgaatgagcgcgccgagttgcttgaagagcttaccggcaccgatatc
tatggcacgatctcacagcacgtgttcgagcgcacgcgggatgaaaagctcgcgctcgat
acgcttttggtccgcgccgacggcgttcagttgctgaccgaagaagagcgtaacgcgaag
cagcaggaagtcatcgctctcgccgctcaggaaatcacgctgggcaaacaagccgaatca
acacgcgcgatgcacgcgtggcgggtggcgttatcggacgctgaaaagcagctcgaacag
gcgtcgctcaaccagcagcaggccgatgcaaaaatcgccgatgccaagcctttgctcgat
cgcctcgccgcaagcgcgcctgcggaaaagctgcgcgctgatcacacggcaatgctttcg
gcgcgcgagaggcacgcggaaaccttgcgtcaagcggcggctgcgcggaacgaaaaacaa
gccgctgcgctcgatgccgcgcggggtttgcgcctggcttctgtgatgggaacgcgggtg
gcgcagcttcgtgaacttgggttgactaccgtgtcggcggaaatcaaatcaattcagtcc
acacttgatcaacatccgcatcgaagcaaacttggtgagcaaatcgtgctttggcaacat
caattcgatgcacgtcaacagacgttgaatgacatcgaattgattcgcacaaagcatgtc
ggattgcgtgcgtcgatagagaaacaggcgggggacatcagcgccaagctcaaagcgatg
tccaacgcaatgggcgcggcagaactggcgcgaaaaactgaacgggaacagcttgagaaa
ctttcgagcatgcacagtggggaaagcgaggcggacttgaagacacgttgccagcgtctt
caagaccagcattatctgttcgggaaactggtggaagttggtgaggcagttacgcgcggg
acccgtcaacttgctacggaccgtgaagaactggcgaaaagaaacgctgcgagcgtgttg
ctcgccgaccagcatgaacgccttgtcaaagacatcgaaatgctcaccgaacaagtccag
gacaaacgcaaactgcttgatcaggagcggcgcattctggaccttgccggacatcgcgca
gcattgcagcctgacgaagcgtgtccgttgtgcggatcgacggagcatccgtccatcgat
gtttatcaaacgctcgatgtttcatcgaccgaacatgcattgaaggaaaaagacacagcg
ttgcgtggcaaaggcaaggagcttctcgccgcaaatgtggcaatcgccgaatcgaatgcc
agtgtgagcgcgctcaaaaagcgtatcgatacatggctgcaagacgacaagggtcatgcc
gagagctggcagatgttgtgcgcagaacttggactcgaaacagttgaccgtgacgcgctc
agcgcgctcgtgcagcaacatacggcgaagttgaagtcggctcaggaaacactcgcggca
gtggatcaacagaagatcgtgattcatcagcacgcgaccgccgcgaatgcggcggagcgg
ttcgcgctcgaacagcaacatgcgttgaagatgagcgaagagcgccagaacgccgacgaa
aagtcgctgaaggagatggccgaccaagccgaagccttgcaaaccacgttgctcaagaaa
gaacgcacgctcgatgaatcggttatttccgccggtcacgcgcgacccgattcgtggacg
caatgccaagcgtggcttgctgaacgcgataacgaatggaaggcttggcagaaggcatcg
gagcgtgttcgtgcattgaatcagcaggcggatcgcttgaaacaatcgctcgaaactgca
tcgactgacgcggcaaaatggtgcgtgcgctggacggcttgcgagaaggatttccccgag
ttgcaagccgatccaattgccgcgaccgacgatccggacgcggccttcatatccgcaata
caccgctacgaaactgcacgcgacaaaaccagttcgctcgaaggcaccgagcgcacgatg
gcaacgcgtttgagcgaagagcaagcgcacgcggagaaaacgtcggctgcgtggttgaat
gctttgacccgcagcgttttcgccgatgaacaatcgttcctgtcggcgctcctgtcccac
gaagagcgcgaccggttgcaaacgcagaagcgcgaactcgacgaactatcgacaacggtt
cgcacactgcgcgcgaacgcggaaaaccgtcgcgcggaattgctgaaagacccgaagacg
gatcaggacgccgaagcgctgaatcgcatgctggaagatctggccgcgtctataaaaatg
ctaagccaacaacaaggcggccttcgcgcgacgcttcaaggcgacgacaaacgccgcgtc
gaacaacaggcgttgtaccgacagatcgatacacaacgcgcccaatacgacttgtggcag
cgcctgagcagcctgatcggttccgccgatggcgcgaagtatcggaagttcgcgcagggc
ctcacgctcgatcatctgatctacctcgcgaaccgccaactcatgcaattgcatgggcgc
tatcaactcaatcggaagcttgccggcgagctggaaatggaagtgctcgacctgtggcaa
ggcgatattgcacgcgatacacgcacgttatcaggcggcgaaagtttccttgtgagtctg
gcgcttgcgctggctttatcggatctggtgagcttcaagacgtccatcgattcattgttc
ctcgatgaagggttcggcacgctcgatggcgaaacgctggagattgcgctcaatgcgctc
gattcattgaacgcgagcggcaagatgatcggcgtgatcagccatgtggaagcgctcaag
gagcgcattccgttgcagatcaaagtggcgaaaagcgtgggaataggattttcgacggtg
gaagtcgtgggcgcttaa
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integrated database retrieval system
