Burkholderia sp. PAMC 26561: AXG89_08795
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Entry
AXG89_08795 CDS
T05481
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bum
Burkholderia sp. PAMC 26561
Pathway
bum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXG89_08795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bum03019
]
AXG89_08795
Enzymes [BR:
bum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AXG89_08795
Messenger RNA biogenesis [BR:
bum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AXG89_08795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
Sacchrp_dh_NADP
CARD_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AME23933
UniProt:
A0A0X8L4V6
LinkDB
All DBs
Position
1:complement(1906845..1908335)
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AA seq
496 aa
AA seq
DB search
MSFDSLGLSEPLLRAVLEQGYTTPTPIQSQAIPAVLNGGDLLAGAQTGTGKTAGFTLPIL
QRLSEAAAPAAGAKRPVRALILTPTRELAAQVEESVRTYGKYLKLKSTVMFGGVGINPQI
DALRRGVDIVVATPGRLLDHMQQKTIDLSKLEILVLDEADRMLDMGFIHDIKRVLAKLPP
KRQNLLFSATFSDEIKTLADSLLDKPALIEVARRNSTVEAIAQKIHPVDRDKKRELLTHL
IRQNNWFQVLVFSRTKHGANRLAEQLTKDGISALAIHGNKSQSARTRALAEFKDNTLQVL
VATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGATGEAVSLVCVDEHQLLKD
IERLIKRPIPQEVIAGFEPDLTQKPEPILRRSQGGGGARQGSPRQGAPKQANGGGGRGPA
KPAHGGGGNGNGNGGGGNGSRSQKPVAAKTGGNGNSGAPRKPEGARPAGALLGGMPRTEG
GGAGRRDTPRTGQRGR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattccctcggcttgtccgaacccttgcttcgcgcggtccttgaacaaggc
tacaccacccctactcccatccagtcgcaggccatcccggccgtgctgaacggtggcgac
ctgctggcaggcgcgcagaccggcaccggcaagacggccggttttacgttgcctatcctg
caacgtttgtccgaggcagccgcccctgcggccggtgccaagcgcccggttcgtgcgctc
atcctgacgcccacgcgcgaactcgccgcgcaggtcgaagaaagcgtgcggacttacggc
aagtacctgaagctgaaatcgaccgtgatgttcggcggcgtgggcatcaatcctcaaatc
gatgcattgcggcgcggcgtggacatcgtcgtggcgacgccgggacggttgctcgatcac
atgcagcaaaagaccatcgacttgtcgaagctcgagatcctcgtgctcgacgaagccgac
cgcatgctcgacatgggcttcattcacgacatcaagcgtgtactcgccaagctgccgccg
aagcgccagaacctgctgttctcggctaccttctccgatgaaatcaagaccctcgccgac
agcctgctcgacaagccggcgctgatcgaagtggcacgccgcaactcgaccgtcgaagcg
atcgcgcaaaagatccacccggtcgatcgcgacaaaaagcgcgagttgctcacgcatctg
atccgccagaacaactggttccaggtgctggtattttcgcggacgaagcacggcgcgaac
cgcctggccgagcagttgacgaaggacggcatcagcgcgctggccattcacggcaacaag
agccagtcggcgcgtacgcgtgctttggccgagttcaaggacaacacgctgcaggtgctc
gtggcgacggatattgcggcgcgcggtatcgatatcgatcaattgccgcacgtggtcaac
ttcgatctgccgaacgtgccggaagactacgttcaccggattggacgcacgggacgtgct
ggggcgacgggcgaagcggtatcgctggtttgcgtcgatgaacatcagttgctcaaggat
atcgagcggctcatcaagcgccctattccgcaggaagtgattgcggggttcgagccggat
ctgacccagaagccggaaccgatcctccgacgcagccagggcggcggcggtgcgcgtcaa
ggttcgccgcgtcagggcgcgccgaaacaggcgaatggcggtggcggccgtggaccggcc
aagccggcgcatggcggcggggggaatggcaacggcaatggcggtggcggcaatggatcg
cgctcgcaaaagccggtagcggccaagacgggcggcaacggcaacagcggcgctccgcgc
aagccggaaggcgcacgaccggctggcgcgttgctgggcggcatgccgcggactgaaggc
ggcggtgctggccggcgcgatacgccgcgcacgggtcaacgcgggcgttaa
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