Burkholderia sp. PAMC 26561: AXG89_10960
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Entry
AXG89_10960 CDS
T05481
Name
(GenBank) ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
bum
Burkholderia sp. PAMC 26561
Brite
KEGG Orthology (KO) [BR:
bum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bum03019
]
AXG89_10960
03009 Ribosome biogenesis [BR:
bum03009
]
AXG89_10960
Messenger RNA biogenesis [BR:
bum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AXG89_10960
Ribosome biogenesis [BR:
bum03009
]
Prokaryotic type
rRNA processing factors
AXG89_10960
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
AME24283
LinkDB
All DBs
Position
1:complement(2392701..2394170)
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AA seq
489 aa
AA seq
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MNEEILINVTPQETRVALVQQGAVQELHVERTLSRGRVGNVYLGKVVRVLPGMQSAFIDI
GLERAAFLHVADIWHPRIAGETHSSAPHIPIEKIVFEGQALMVQVVKDPIGTKGARLSTQ
VSIAGRTLVYLPQEPHIGISQKIASETEREAIRARLTAVLPVDEKGGYIVRTIAEDATSE
ELAADVAYLRKTWTTIVAQAQRVAPTSLLHQDLNLAQRVLRDFVNDETSRIQVDSRETYQ
MLADFAAEFTPAVASRVHHYSGERPLYDLYNIEAEIQRALSRRVDLKSGGYLMIDQTEAM
TTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENVEHRDQV
LGELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPTCDGKGQVKTPRTV
CYDVLREIMRESRQFNPREFRVVASQQVIDLFLEEESQHLAMLMDFIGKPVSLQVESNLS
QEQYDIVLM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagaaattctgatcaacgtcacaccgcaggaaacccgcgttgccctcgttcag
caaggcgcggtgcaggagcttcatgtcgagcgcacgttgtcgcgcggccgagtgggtaat
gtatatctcggcaaggtcgtgcgtgtattgccgggcatgcagtcggcgtttatcgacata
gggctcgagcgcgccgcgttcctccatgttgccgatatctggcatccgcgcattgccggc
gagacgcattcgagtgcgccgcatatccccatcgagaagatcgtgtttgaagggcaggcg
ctgatggtgcaggtggtgaaggatcctatcggtaccaagggcgcgcggctttcgactcag
gtgagcatcgcaggacgtacgctggtttatttgccgcaggaaccacatatcgggatttcg
cagaagatcgcgagtgagaccgagcgcgaggcgattcgtgcgcgtctcacggcggttctg
cccgtggatgaaaaaggcggatacatcgtccgcacgatcgcagaagatgcgacgagcgaa
gaacttgccgccgacgtcgcatacttgcgcaagacatggacgacgatcgtcgcgcaggcc
cagcgcgtggcgccgacttcgttgctgcatcaggatctcaatctggcacagcgcgtattg
cgcgatttcgtgaatgacgagacctcgcgcattcaagtggattcgcgcgagacgtatcaa
atgctcgcggactttgcggccgagttcacgccggcggttgcatcgcgcgtgcatcattat
tcgggcgagcgcccgctttacgatctgtacaacatcgaagcggagattcagcgcgcgtta
tcccgccgcgtggatctgaagtcgggcggatatctgatgatcgatcagaccgaggccatg
accactatcgacgtgaatacgggcggttatgtcggcgcccggaatttcgacgatacgatc
ttcaagaccaatctcgaagccgcccatacgattgcgcggcaattgcggctcaggaatctg
ggcgggatcatcatcatcgatttcatcgatatggagaacgtcgagcatcgcgatcaggtt
ctcggggagttgaagaaggcgttgtcgcgcgaccgcacgcgggtgacggtcaacggattt
tcccagcttggactggtcgagatgacgcgcaagcgcacgcgcgaatcgcttgcccatgtg
ctgtgcgaaccttgcccgacgtgcgatggaaaaggccaagtcaagacaccgcgaacggtg
tgttatgacgtgctgcgcgagatcatgcgcgagtcgcggcaattcaacccgcgcgagttc
cgggtggtggcgtcacagcaggtaatcgatctgttcctggaagaagagtcgcagcatctg
gccatgctgatggactttatcggcaagccggtgtcgttgcaggtcgagtcgaatttgagt
caggaacaatacgacattgtcttgatgtga
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