KEGG   Burkholderia sp. PAMC 26561: AXG89_12830
Entry
AXG89_12830       CDS       T05481                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
bum  Burkholderia sp. PAMC 26561
Brite
KEGG Orthology (KO) [BR:bum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bum03032]
    AXG89_12830
   03036 Chromosome and associated proteins [BR:bum03036]
    AXG89_12830
   03400 DNA repair and recombination proteins [BR:bum03400]
    AXG89_12830
DNA replication proteins [BR:bum03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AXG89_12830
Chromosome and associated proteins [BR:bum03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    AXG89_12830
DNA repair and recombination proteins [BR:bum03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      AXG89_12830
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HYPK_UBA HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: AME24607
UniProt: A0A0X8L641
LinkDB
Position
1:2803162..2803434
AA seq 90 aa
MNKTELIDHIAQQADISKAAAGRALEAVIGGVKTTLEKGGSVTLVGFGTFAVGKRTARTG
RNPRTGDAIKIKAAKVPKFRAGKALKDALN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaagacggaattgatcgaccatatcgcgcagcaggcggatatatcgaaggcagca
gccggacgggcgctcgaagcggtgatcggcggcgtgaagactacgctggaaaagggcggt
tcggtgacgcttgtgggcttcggaacgttcgcggtcggcaagcgcacggcacgcacgggc
cgcaatccccgaacgggcgacgcgatcaagatcaaggccgcaaaggttcctaaatttcgg
gctggcaaagcactaaaagatgcgctaaactag

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