Burkholderia sp. PAMC 26561: AXG89_14870
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Entry
AXG89_14870 CDS
T05481
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bum
Burkholderia sp. PAMC 26561
Brite
KEGG Orthology (KO) [BR:
bum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bum03016
]
AXG89_14870 (truB)
Enzymes [BR:
bum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AXG89_14870 (truB)
Transfer RNA biogenesis [BR:
bum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AXG89_14870 (truB)
Prokaryotic type
AXG89_14870 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AME24941
LinkDB
All DBs
Position
1:complement(3279719..3280648)
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AA seq
309 aa
AA seq
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MNGSARPKIPRRLLDGVLLLDKPLGLSSNDALVRAKRIYLAKKAGHTGTLDPLATGLLPL
CFGEATKFSQDLLEADKTYEATMRLGVRTITGDAEGEALETREVTCDEAAIHAAMTGFRG
DITQIPPMYSALKRDGKPLYEYARAGQTVEREARNVTILALEMIACALPNVTFRVTCSKG
TYVRTLAEDIGEKLGCGAHLVALRRTGVGTLTLENAVTLDTLSEATPEERDRWLQPVDAL
LSTFPAVLLDADASRRFTQGQRLKLADISDAPADADRVRVYSRDEHRLLGVARAGEGVLA
PERLVVSAG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaacggttccgctcgtccgaagatcccgcgtcgtctgctcgacggcgtgttgctgctc
gataaacccctcggcctttccagcaacgacgcgctggttcgcgccaagcgaatttatctg
gcgaaaaaagccgggcataccggcacgctcgatccgctcgcgaccggtttgttgccgctg
tgctttggcgaggcgacgaagttttcgcaggatttgctcgaagccgataaaacctacgaa
gccaccatgcgcctcggcgttcgcacgatcacgggcgacgcggaaggcgaggcgctggaa
acgcgcgaggtcacctgcgacgaagccgcgatccatgcggcaatgaccggtttccgcggc
gacatcacgcaaattccgccgatgtattcagcgctcaaacgcgacggcaagcctttgtac
gaatacgcgcgggcggggcaaaccgtcgagcgcgaagcgcgcaacgtgaccatcctcgcg
ctggagatgatcgcgtgcgcgttgccgaacgtgacgtttcgcgtgacgtgcagcaagggc
acgtatgtacgcacgcttgctgaggatatcggtgagaagcttgggtgcggggcgcatctg
gtggcgctgcggcgcacgggtgtgggcacgttgacgctcgaaaacgcggtgacgctggat
acgctttcggaggcaacgcccgaagaacgcgatcgctggctgcaaccggtcgatgcgctg
ctgtcgacatttccggccgttcttctcgacgccgatgccagccgccgcttcacgcaaggt
cagcggctcaagctcgcggacatcagcgacgcgccggcggatgcggatcgcgtgcgtgtt
tattcgcgcgacgaacaccgtctgctgggcgtggcccgagccggcgagggggtgctggcg
ccggaacggctggtggtatcggcgggataa
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