Burkholderia sp. PAMC 26561: AXG89_19660
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Entry
AXG89_19660 CDS
T05481
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
bum
Burkholderia sp. PAMC 26561
Pathway
bum00260
Glycine, serine and threonine metabolism
bum01100
Metabolic pathways
Module
bum_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bum00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AXG89_19660
Enzymes [BR:
bum01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
AXG89_19660
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
AXG89_19660
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
Pyr_redox_3
FAD_oxidored
NAD_binding_8
FAD_binding_2
DAO
Pyr_redox
HI0933_like
NAD_binding_7
Thi4
FAD_binding_3
AdoHcyase_NAD
GIDA
AlaDh_PNT_C
XdhC_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AME26127
UniProt:
A0A109WPQ7
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Position
2:920341..923343
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AA seq
1000 aa
AA seq
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MSQKDRLATGGRINRAISLTFTFNGKTYQGHQGDTLASALLANGVHFVARSWKYHRPRGI
VTADVAEPNAVVQLETGAYTVPNARATEIELYQGLVATSVNAKPSIENDRMAVNQKIARF
IPAGFYYKTFMWPRKFWPKYEEVIRDAAGLGKAPEQVDADRYDKCFAHCDVLVVGAGPSG
LAAAHAAALSGARVFLVDDQPELGGSLLSCRAEIDGAPGLKWAQKIEAELRKMPDVKILC
RSTAFGYQDHNLVTVTQRLTEHLPVSMRKGTRELMWKIRAKRVILATGAQERPIVFGNND
LPGVMLASAVSSYLHRFAVLPGRNAVVFTNNDSGYQCALDLKAAGAQVTVVDPRLADEKG
ALQAQAKRYGVKVLNGSVVTVAQGKLRVASVEINAYSNATVGAKQADLPCDLLAMSGGWS
PILHLFAQSGGKAHWHDEKLCFVPGKAMQAESSVGGCAGEFTLARAIRFAVDAGVDAARA
VGLIVARPTPVQVAEISEAPLTPLWLVGGRELATRGPKQFIDYQNDVSAADIFLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAQALNKTIPETGTTTFRPNYTPVTFGTFAG
RELGEFLDPVRKTAVHEWHVENGAAFEDVGNWKRPWYYPRPGEDMHAAVARESLATRTSV
GILDASTLGKIDIQGPDAAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLA
DQHYMMTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVC
RDIDFANAAFPFMSFREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMAAGAE
FDITPYGTETMHVLRAEKGYIIVGQDTDGSMTPYDLGMGGLVAKSKDFLGKRSLTRSDTA
KAGRKQLVGLLAEDGSFVIPEGSQIVAGPFSGETAPMLGHVTSSYFSPILKRSIAMAVIK
GGLDKIGESVMIPLAGGKQMPAKITSSVFYDSEGARQHVE
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaccgactcgctacgggcgggcgcatcaatcgcgcgatctcgctcacg
ttcacgttcaacggcaagacgtatcagggccatcagggcgacacgctcgcgtccgcgctg
ctcgccaatggtgtgcactttgtcgcgcgtagctggaagtaccatcggccgcgcggcatt
gtgacagccgacgttgccgagccgaatgcggtcgtccagctcgagaccggcgcttatacc
gtgccgaatgcgcgtgcgacggaaatcgagttgtatcaagggctggtcgccacgagcgtg
aacgcgaagccgagcattgaaaacgatcgcatggcggtgaaccagaagatcgcgcgtttc
attcccgccggtttctattacaagaccttcatgtggccgcgcaagttctggccgaagtac
gaagaagtgattcgcgacgccgccggcctcggcaaggcgccggaacaagtcgatgccgac
cgctacgacaagtgcttcgcgcattgcgacgtgctcgtggtcggcgcgggtccttcgggc
cttgctgcggcgcatgcggcggctttgtcgggcgcgcgtgtgtttctcgtcgatgaccag
ccggaactcggtggctcgctgctgtcgtgccgcgcggaaatcgatggtgcgcctggcttg
aaatgggcgcaaaagatcgaagccgaattgcgcaagatgcccgatgtgaagatcctgtgc
cgcagcacggcgtttgggtatcaggaccacaacctcgtcaccgtcacgcagcgtctgact
gagcatctgccggtatcgatgagaaagggtacgcgcgaactgatgtggaaaattcgcgcc
aagcgcgtgattctcgcgaccggcgcgcaggaacgccccatcgtatttggcaacaacgac
cttccgggcgtgatgctggcgtcggccgtgtcttcgtatctgcatcgcttcgccgtgctg
ccgggacgtaacgcggtggtgttcacgaacaacgacagcggctaccaatgtgcactggat
ctgaaggctgcgggcgcgcaagtgaccgtcgtggaccctcgtctcgccgatgaaaaaggc
gcgctgcaggctcaggcaaaacgttatggcgtaaaggtgctgaacggatcggtcgtgacg
gttgcgcagggcaagctgcgggttgcatcggttgaaatcaacgcttattcgaacgccacc
gttggcgcaaagcaagccgacctgccttgcgacctgctcgccatgtccggcggctggagc
ccgatcctgcacctgttcgcacagtccggcggcaaggcgcactggcatgacgaaaaactg
tgtttcgtccccggcaaggccatgcaagccgagagcagcgtgggcggttgcgcgggcgaa
ttcacgcttgctcgcgcgattcgttttgccgtcgatgcaggcgtggatgcagcgcgtgcg
gtcggcttgatcgtcgcacgcccgacgcccgtgcaagtcgccgagatcagcgaagcaccg
ttgacgccgctttggctcgtcggcggccgcgagctggcgacgcggggtcccaagcagttc
atcgactatcaaaacgatgtatccgccgccgatattttccttgcggcgcgcgaaggtttc
gagtcggtcgagcacgtgaagcgctatacggcgatgggattcggcacggatcagggcaaa
ctcggcaatatcaacggcatggcgattctcgcgcaagccttgaacaagaccatccccgaa
acaggcacgacgaccttccgtccgaactacacgccggtgaccttcggcacgttcgccggc
cgcgagctgggcgagtttctcgatccggtccgcaagactgcggtgcacgagtggcacgtt
gaaaacggcgctgcgttcgaagatgtgggcaactggaaacggccctggtattacccgcgt
ccgggtgaagacatgcacgcagcggtcgcccgtgaatcgctcgccacgcgtacgagcgtc
ggcatcctcgatgcatcgacgcttggcaagatcgacattcaaggtcccgacgccgcgaag
ctgctcaactgggtctacacaaacccgtggagcaagctggaagtgggcaaatgccgctac
ggcctgatgctcgatgaaaacggcatgatcttcgacgacggcgtgaccgtacgtctcgcc
gaccagcactacatgatgacgaccaccaccggcggcgcggctcgcgtgctgacgtggctc
gaacgctggttgcagaccgagtggccggacatgcgcgtgcgcctggcatcggtgacggat
cactgggcgacctttgccgtggtcggaccgaacagccgcaaagtcctgcagaaggtctgt
cgcgatatcgacttcgcgaatgccgcgtttccgttcatgagctttcgagaagggactgtc
gcgggcgcggcatcacgtgtcatgcgcatcagcttttccggcgaactggcatacgaagtg
aacgtgcccgcgaacgtggggcgcgcggtgtgggaagcgttgatggcggccggcgccgag
tttgacatcacgccttatggcacggaaaccatgcacgtgttgcgtgcggagaagggttac
atcatcgtgggccaggataccgatggttccatgacgccgtacgaccttggcatgggcggg
ctcgttgcgaagtcgaaggactttcttggcaagcgttcgctgacgcgttcggatacggcc
aaggcgggacgcaagcaactggtcggactgctcgccgaagacgggtcgttcgtgatcccg
gaaggctcgcaaatcgtcgcaggtccgttcagcggagagacagcaccgatgctcggccat
gtcacctccagctatttcagccctattttaaagcgctcgattgcgatggccgtgatcaag
ggcggtctcgacaagatcggcgagtcagtgatgattccgcttgccggcggcaagcagatg
ccggcaaaaatcaccagctcggtgttctacgacagcgaaggagcacgtcaacatgtggaa
tga
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