Burkholderia sp. PAMC 26561: AXG89_20300
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Entry
AXG89_20300 CDS
T05481
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bum
Burkholderia sp. PAMC 26561
Pathway
bum03030
DNA replication
bum03410
Base excision repair
bum03420
Nucleotide excision repair
bum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AXG89_20300
03410 Base excision repair
AXG89_20300
03420 Nucleotide excision repair
AXG89_20300
03440 Homologous recombination
AXG89_20300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bum03032
]
AXG89_20300
03400 DNA repair and recombination proteins [BR:
bum03400
]
AXG89_20300
Enzymes [BR:
bum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AXG89_20300
DNA replication proteins [BR:
bum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AXG89_20300
DNA repair and recombination proteins [BR:
bum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AXG89_20300
NER (nucleotide excision repair)
GGR (global genome repair) factors
AXG89_20300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AME26239
UniProt:
A0A0X8L971
LinkDB
All DBs
Position
2:1076702..1079440
Genome browser
AA seq
912 aa
AA seq
DB search
MPEELNLEGKTLLLVDGSSYLYRAYHAMPDLRGPDGGPTGALYGMINMLRRLRKDINAEY
SACVFDAKGKTFRDDWYADYKANRPSMPDDLSKQIEPIHETVRALGWPLVMIEGVEADDV
IGTLAVAAEKRGMKVIVSTGDKDLAQLVTDHVTLINTMSNETLDRAGVLNKFGVPPERIV
DYLSLIGDTVDNVPGVEKCGPKTALKWLTQYDTLDGIVAHASEIKGAVGDNLRKALDFLP
MARKLVTVHTECDLAAQIASIEETLPSRPEARDELRDLFTRHGFKTWLREVEIADAVEGP
TDTPPAAATEMERHYETVQTWEQFDEWLARINAAELTSFDTETTALDPMLAQLVGLSVSV
EPGRAAYIPVAHRGPDSPLQLPRDEVLQKLKSWLEDPSKKKVGQHLKYDEQVLANYGIEL
NGVEHDTLLQSYVIESHRPHDMDNLALRHLGAKTIKYEEVAGKGASQIGFDEVALDQAAP
YAAEDADITLRLHQALYPQLVDEAQLLKVYRDIEMPTARVLRKMERNGVLIDGELLRVQS
GQIATRLIQLEAEAYMLAGGEFNLGSPKQIGQIFFEKLQLPVVKKTPSGAPSTDEEVLQK
LAEDYPLPKILLEHRGLSKLKSTYTDKLPRMVNAKTGRVHTNYAQAVAVTGRLSSNEPNL
QNIPVRTAEGRRIREAFIAPPGSKIVSADYSQIELRIMAHISGDPSLMRSFAEGEDVHRA
TASEIFGVTPIEVSNDQRRIAKVINFGLIYGMSAFGLASNIGISRDAAKLYIDKYFQRYP
GVANYMDETRTKAKRDGFVETVFGRRLWLPEINGGSGPRRQGAERAAINAPMQGTAADLI
KLSMIAVQDWLEASKIETKMIMQVHDELVLEVPEAELPEVRKRLPELMCGVAKLKVPLVA
EVGVGNNWEEAH
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacttaatcttgaaggtaagaccctgctattggtcgacggatccagctat
ctgtatcgggcctaccacgccatgccggatctgcgcgggccggatggcggaccgacaggc
gcgttgtacggaatgatcaacatgctgcggcgcctgcggaaggacatcaatgcagagtat
agcgcgtgcgtattcgacgccaagggcaagacatttcgcgacgactggtacgcggattac
aaggcaaaccggccatccatgcccgatgacctctcgaagcagatagaacccatccacgag
accgttcgggcgctcggctggccgctcgtgatgatcgaaggcgtggaggccgacgacgtc
atcggtacgcttgcagtggccgccgaaaagcgcggcatgaaggttatcgtgtcgacgggc
gacaaggatctggcgcagcttgtgacggatcatgtcaccctcatcaatacgatgtccaac
gagacgctcgatcgcgccggggtgctgaataagttcggcgtgccgccggagcggatcgtc
gactatctctcgctcatcggcgatacggtcgataacgtaccgggcgtcgagaaatgcggg
ccgaagacggcgctgaagtggctcacacaatacgacaccctcgatggcatcgtggcacac
gcgagcgaaatcaaaggtgcggtgggagacaatctgcgcaaggctctcgacttccttccc
atggccagaaagctcgttaccgtacatacggaatgcgatctagcggcgcagatcgcgtct
atcgaggaaacgttgccttcacggcccgaagcgcgcgacgaattgcgcgatctctttacg
cgccacggcttcaagacgtggttgcgcgaagtcgagatcgccgacgccgtggaaggtccc
acggatacaccgcccgcggccgccacggaaatggaacggcattacgaaacggtgcagaca
tgggaacaattcgacgaatggcttgcccggatcaacgctgctgagctaacgtccttcgat
acggaaaccaccgccctcgatcccatgctcgcgcagctcgtgggattgtcggtatcggtc
gaaccgggacgtgcggcctatatccctgttgcgcatcgcgggccggattcgcctttgcaa
ttgccgcgtgacgaagtcctgcagaaactgaaatcgtggctggaagatccatcgaagaag
aaagtgggacagcacctcaaatacgatgaacaagtgctcgcgaactacggcatcgagttg
aatggcgtcgagcacgacacgttgttgcagtcctatgtgatcgaatcgcacaggccgcac
gacatggacaatctcgcgttgcggcatctcggcgcgaaaaccatcaagtatgaagaggtg
gcgggcaagggcgcgtcgcagatcggcttcgacgaagtcgcgctcgatcaggccgcgccc
tacgctgccgaagacgccgacatcacgttgcggctgcatcaggcgctttatccgcaactt
gtcgacgaagcgcaattgctgaaggtgtatcgcgatattgaaatgcctacggcgcgcgtg
ttgcgcaagatggagcgcaatggcgtactgatcgacggcgagttgctgcgcgtgcaaagc
gggcagattgcgacgcgtctgatccagctcgaggctgaagcgtacatgctcgcgggcggc
gaattcaatcttggatcgcccaagcagatcgggcagattttcttcgagaagctgcaattg
ccggtggtcaagaagacgccgagcggcgcgccttccaccgacgaagaagtgctgcaaaag
ctcgccgaagactatccgttgccgaagatcctgctcgaacatcgcggtttgtcgaagctc
aagtcgacttatacggacaagttgccacgcatggtcaacgcgaagaccggccgcgtgcat
acgaactacgcgcaggccgttgcggtgacggggcgtttgtcatcgaatgagccgaacttg
cagaacattccggtgcgtaccgccgaaggccggcgcattcgcgaagcattcattgcgccc
ccgggaagcaagatcgtgtcggcggattattcgcaaatcgagctgcggatcatggcgcat
atctccggcgatccctcgctcatgcgctccttcgccgagggcgaggacgtgcatcgtgcg
acggcctccgagattttcggcgtgacgcccatcgaggtgtcgaacgatcagcggcgcatc
gcgaaggtcatcaactttggcttgatctatggcatgagcgcgttcggactggcatcgaat
atcggcatctcgcgtgatgcggcgaagctttatatcgacaagtatttccagcgctatcca
ggcgttgccaactacatggacgagacccgcacgaaggcgaagcgcgatgggttcgtggag
acggtgttcgggcgccgtctgtggttgcccgagatcaacggcggcagcggaccgcgccgg
cagggcgccgaacgcgcggcaatcaacgcaccgatgcagggtacggccgccgacctgatc
aagctgtcgatgatcgcggtgcaggactggctggaagcatcgaagatcgaaacgaagatg
atcatgcaggtccacgatgaactcgtgctcgaagtgcccgaagccgagctgccggaagtg
cgcaagcgtctgccggaactcatgtgcggcgtcgcgaagctgaaggtgccgctcgtcgcc
gaagtcggcgtggggaacaactgggaagaagcgcattga
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