Burkholderia sp. PAMC 26561: AXG89_33415
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Entry
AXG89_33415 CDS
T05481
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bum
Burkholderia sp. PAMC 26561
Pathway
bum03420
Nucleotide excision repair
bum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AXG89_33415
03430 Mismatch repair
AXG89_33415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bum03400
]
AXG89_33415
Enzymes [BR:
bum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AXG89_33415
DNA repair and recombination proteins [BR:
bum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AXG89_33415
MMR (mismatch excision repair)
Other MMR factors
AXG89_33415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
Viral_helicase1
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
AME28686
UniProt:
A0A125SIP8
LinkDB
All DBs
Position
unnamed4:complement(124124..125167)
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AA seq
347 aa
AA seq
DB search
MDKTVIFAVAGSGKTYRIVERLDKVRRVLIVTYTEANRDNLRTRIIQKFGHFPANIVLYT
YFTFLHSFCYRPFLLSEKRTKGMTYERPLEKGPKFGLGDDRRYMTKGRWLYHHRLAKYVE
QTDTVNDVIARIEKYFDAFFVDEVQDFAGHDFNLLMSLCRSEVECMFVGDFFQHTYDTSR
DGAVNINLHADYEKYKARFKAAKMDLDLVSLIKSRRCSKSVCDFITEQIGIQIKSHSDAL
TEVRLVEDHVVVQEIYQSPEIVKLFLQEHYKYGCYSQNWGASKGLDHYQDVCVVLHPAAL
DAWKAGALATLNPETRNKLYVACSRARGNLTFVPDAFLKQHKRKRAK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaacagtgatcttcgccgtcgccggctcgggaaaaacatacaggattgtcgag
cgattggataaggtccgacgcgtcttgattgttacctacactgaagcaaaccgggacaat
ctgcggacccgaatcatccaaaagttcggacattttccagcgaacatcgtcctttacaca
tacttcacatttttgcattcgttctgctatcgaccgttcttgctgagcgagaagcgaacg
aaagggatgacgtatgagcggcctttagaaaaggggccgaaatttgggcttggcgatgac
cgccgctatatgacaaaggggcgctggctataccatcatcgactcgcaaaatatgtggag
caaactgacacggtcaacgatgtgatagcgcgaatcgagaaatacttcgatgccttcttc
gtcgacgaggtccaggactttgctggacatgatttcaatctgctgatgtcactttgccgg
agcgaggtcgagtgcatgtttgtgggtgacttttttcagcatacatacgatacgagccgc
gatggcgcggtgaacatcaaccttcacgccgactatgagaagtacaaagcgcgcttcaaa
gcggcaaagatggacttggatctcgtatcgctgataaaaagtcggagatgtagcaagtca
gtctgtgatttcattactgagcagattggaattcagatcaagtctcactcggatgcgctc
actgaagtcagattggtcgaggatcatgtggttgtgcaggaaatctatcaatcgcccgaa
atcgtaaagctctttctacaggagcattacaaatatggctgctactcgcagaactggggg
gcttcgaaaggtctcgatcactaccaggacgtatgtgtggtgctgcaccctgccgcactc
gatgcctggaaggctggagcgttggcaaccctcaacccagagactcgcaacaaactctat
gtcgcatgctcacgagcacgcggcaatttgaccttcgttcccgatgcattcttgaagcaa
cacaaacgtaagcgagctaagtag
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