Burkholderia sp. PAMC 26561: AXG89_36090
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Entry
AXG89_36090 CDS
T05481
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03086
RNA polymerase primary sigma factor
Organism
bum
Burkholderia sp. PAMC 26561
Pathway
bum02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bum00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AXG89_36090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bum03021
]
AXG89_36090
Transcription machinery [BR:
bum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AXG89_36090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
PspA_IM30
Sigma70_r4_2
CYP38_PsbQ-like
Motif
Other DBs
NCBI-ProteinID:
AMH43180
LinkDB
All DBs
Position
3:422057..424042
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AA seq
661 aa
AA seq
DB search
MTSFDPTESNAGNGVPAKKSKARRGSAEKMSRPMDESAVSPEQADERQKQMRALIQLGKQ
QGYLTHAEINDHLPGNFAQTSAIETIVSTFRDMGVAVYEEAPDSETLLLNDSTPTAVSDE
QSDEEAEVTLATVDSEFGRTTDPVRMYMREMGSTELLTRAGEIEIAKRIEDGLGEMIKAA
FACPSTVVTLLTTVDKVVAGELRIDELVDGFKDVSTLDEAVVDDSDAEIDEAELASESDD
EEGETDDEQATRANATRLKHLLRDCLPIFVNVRDQFDAFHAAYSADDARTGDWPTVQEHI
QNELATVRFTARTIDRLCAEVHEQVEHVRAIERRILKIAVDLAGMPREKFVEVFPGHETD
LEWTMRHAAASTSYGKALERALPAIQAEQQKLIEIEAQLMLPLSQLKALNKQMTSAEHKM
RQAKREMTEANLRLVISIAKKYVNRGMHFLDLIQEGNIGLMKAVDKFEYRRGWKFSTYAT
WWVRQAVTRSLADQGRTIRVPVHMIETINKLNRVSREILQQTGQEAHPSVLAVRLDLSEE
KVRSILKIARQPVSLETPLGEDGDTTLGDMVEDSATESPADAAMHADMRLAIKDALDSLS
PREAKVLRMRFGIDTVSDHTLEEVGKQFDVTRERIRQIESKAMRKLVHPSRSEKLRSFLA
H
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttttgatccaaccgaatctaacgccggaaacggtgttcctgccaaaaaatcg
aaggcccgccgtgggtccgcggaaaagatgtcgcgtcccatggacgaaagcgctgtttcg
cccgagcaggccgatgagcgtcagaagcagatgcgcgcgctgatccagctcggcaagcag
cagggctacctgacgcacgcggagatcaacgaccacttgccaggtaactttgcgcagacg
tcggctatcgaaaccatcgtcagcacattccgcgacatgggcgtggccgtctatgaagaa
gcgccggactccgagacgctgctgctcaacgactccacgccgaccgctgtatcggacgaa
caatccgacgaagaagccgaagtcacgctcgcgaccgtggactcggaattcggccgcacc
accgaccccgtgcgtatgtacatgcgcgaaatgggcagcacggagttgctgacccgtgcc
ggcgaaatcgagattgcgaagcggattgaagatggccttggcgaaatgatcaaggcggcg
ttcgcttgcccgtcgacggttgtcacgttgctcacgaccgtggacaaggtcgtggcgggt
gaattgcgcatcgacgaactcgtcgatggtttcaaggacgtgagcacgctcgacgaagca
gtcgtcgacgactcagacgccgaaatcgatgaagccgaactcgcgtcggaaagcgacgac
gaagaaggcgagaccgacgacgaacaagccacgcgcgcgaacgccacgcgtctcaagcac
ttgctgcgtgattgcctgcctattttcgtgaacgtgcgtgatcagttcgacgcgttccac
gcggcatacagcgcagacgatgcacgtacgggcgactggccaaccgtgcaggaacatatc
cagaacgaactggccaccgtgcgttttaccgcccggaccatcgaccggttgtgcgctgag
gttcatgagcaggtcgagcatgttcgcgccatcgagcgtcgtatcctgaagatcgcggtc
gacctcgccggcatgccgcgcgagaagtttgtcgaagtgttcccgggtcacgagacggat
ctcgagtggaccatgcgtcatgctgcggcatcgacttcgtacggcaaggcgctcgagcgc
gcgctgccggccatccaggccgaacagcaaaagctgatcgaaatcgaagcgcaattgatg
ctgccgctttcgcaactgaaggcgttgaacaagcagatgacgtccgccgagcacaagatg
cgtcaggcaaagcgcgagatgaccgaagcgaatctgcgtctggtgatctcgattgcaaag
aaatacgtgaaccgcggcatgcatttcctggatctgatccaggaaggcaatatcggcttg
atgaaagccgtggacaagttcgaataccggcgcggctggaagttctcgacgtacgccacg
tggtgggttcgccaggctgtgacgcgttcgctcgccgatcagggccggaccatccgtgta
ccggtgcatatgatcgagaccatcaacaagctgaaccgtgtatcgcgtgaaatcctgcag
cagacgggtcaggaagcacatccgtcggtgctggccgttcgtctcgacttgtcggaagag
aaggttcgcagcatcctgaagattgcgcgtcagccggtttcgctggaaacgcctttgggc
gaagacggcgacaccacgctgggcgacatggttgaagattcggcgaccgagtcgccggct
gatgccgccatgcacgccgacatgcgtctcgcgatcaaggacgcactcgattcactgtcg
ccgcgtgaggcgaaggtgctgagaatgcgttttggcatcgacacggtttccgaccatacg
ctggaagaagtcggcaagcagttcgatgtgacgcgtgaacggattcgccagattgaaagc
aaggcaatgcgcaagctcgtgcatccgagccgttcggagaagctgaggtcgttcctcgcg
cattaa
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