KEGG   Burkholderia sp. PAMC 26561: AXG89_36090
Entry
AXG89_36090       CDS       T05481                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K03086  RNA polymerase primary sigma factor
Organism
bum  Burkholderia sp. PAMC 26561
Pathway
bum02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bum00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AXG89_36090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bum03021]
    AXG89_36090
Transcription machinery [BR:bum03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AXG89_36090
SSDB
Motif
Pfam: Sigma70_ner Sigma70_r3 Sigma70_r1_1 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 PspA_IM30 Sigma70_r4_2 CYP38_PsbQ-like
Other DBs
NCBI-ProteinID: AMH43180
LinkDB
Position
3:422057..424042
AA seq 661 aa
MTSFDPTESNAGNGVPAKKSKARRGSAEKMSRPMDESAVSPEQADERQKQMRALIQLGKQ
QGYLTHAEINDHLPGNFAQTSAIETIVSTFRDMGVAVYEEAPDSETLLLNDSTPTAVSDE
QSDEEAEVTLATVDSEFGRTTDPVRMYMREMGSTELLTRAGEIEIAKRIEDGLGEMIKAA
FACPSTVVTLLTTVDKVVAGELRIDELVDGFKDVSTLDEAVVDDSDAEIDEAELASESDD
EEGETDDEQATRANATRLKHLLRDCLPIFVNVRDQFDAFHAAYSADDARTGDWPTVQEHI
QNELATVRFTARTIDRLCAEVHEQVEHVRAIERRILKIAVDLAGMPREKFVEVFPGHETD
LEWTMRHAAASTSYGKALERALPAIQAEQQKLIEIEAQLMLPLSQLKALNKQMTSAEHKM
RQAKREMTEANLRLVISIAKKYVNRGMHFLDLIQEGNIGLMKAVDKFEYRRGWKFSTYAT
WWVRQAVTRSLADQGRTIRVPVHMIETINKLNRVSREILQQTGQEAHPSVLAVRLDLSEE
KVRSILKIARQPVSLETPLGEDGDTTLGDMVEDSATESPADAAMHADMRLAIKDALDSLS
PREAKVLRMRFGIDTVSDHTLEEVGKQFDVTRERIRQIESKAMRKLVHPSRSEKLRSFLA
H
NT seq 1986 nt   +upstreamnt  +downstreamnt
atgacaagttttgatccaaccgaatctaacgccggaaacggtgttcctgccaaaaaatcg
aaggcccgccgtgggtccgcggaaaagatgtcgcgtcccatggacgaaagcgctgtttcg
cccgagcaggccgatgagcgtcagaagcagatgcgcgcgctgatccagctcggcaagcag
cagggctacctgacgcacgcggagatcaacgaccacttgccaggtaactttgcgcagacg
tcggctatcgaaaccatcgtcagcacattccgcgacatgggcgtggccgtctatgaagaa
gcgccggactccgagacgctgctgctcaacgactccacgccgaccgctgtatcggacgaa
caatccgacgaagaagccgaagtcacgctcgcgaccgtggactcggaattcggccgcacc
accgaccccgtgcgtatgtacatgcgcgaaatgggcagcacggagttgctgacccgtgcc
ggcgaaatcgagattgcgaagcggattgaagatggccttggcgaaatgatcaaggcggcg
ttcgcttgcccgtcgacggttgtcacgttgctcacgaccgtggacaaggtcgtggcgggt
gaattgcgcatcgacgaactcgtcgatggtttcaaggacgtgagcacgctcgacgaagca
gtcgtcgacgactcagacgccgaaatcgatgaagccgaactcgcgtcggaaagcgacgac
gaagaaggcgagaccgacgacgaacaagccacgcgcgcgaacgccacgcgtctcaagcac
ttgctgcgtgattgcctgcctattttcgtgaacgtgcgtgatcagttcgacgcgttccac
gcggcatacagcgcagacgatgcacgtacgggcgactggccaaccgtgcaggaacatatc
cagaacgaactggccaccgtgcgttttaccgcccggaccatcgaccggttgtgcgctgag
gttcatgagcaggtcgagcatgttcgcgccatcgagcgtcgtatcctgaagatcgcggtc
gacctcgccggcatgccgcgcgagaagtttgtcgaagtgttcccgggtcacgagacggat
ctcgagtggaccatgcgtcatgctgcggcatcgacttcgtacggcaaggcgctcgagcgc
gcgctgccggccatccaggccgaacagcaaaagctgatcgaaatcgaagcgcaattgatg
ctgccgctttcgcaactgaaggcgttgaacaagcagatgacgtccgccgagcacaagatg
cgtcaggcaaagcgcgagatgaccgaagcgaatctgcgtctggtgatctcgattgcaaag
aaatacgtgaaccgcggcatgcatttcctggatctgatccaggaaggcaatatcggcttg
atgaaagccgtggacaagttcgaataccggcgcggctggaagttctcgacgtacgccacg
tggtgggttcgccaggctgtgacgcgttcgctcgccgatcagggccggaccatccgtgta
ccggtgcatatgatcgagaccatcaacaagctgaaccgtgtatcgcgtgaaatcctgcag
cagacgggtcaggaagcacatccgtcggtgctggccgttcgtctcgacttgtcggaagag
aaggttcgcagcatcctgaagattgcgcgtcagccggtttcgctggaaacgcctttgggc
gaagacggcgacaccacgctgggcgacatggttgaagattcggcgaccgagtcgccggct
gatgccgccatgcacgccgacatgcgtctcgcgatcaaggacgcactcgattcactgtcg
ccgcgtgaggcgaaggtgctgagaatgcgttttggcatcgacacggtttccgaccatacg
ctggaagaagtcggcaagcagttcgatgtgacgcgtgaacggattcgccagattgaaagc
aaggcaatgcgcaagctcgtgcatccgagccgttcggagaagctgaggtcgttcctcgcg
cattaa

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