Burkholderia sp. PAMC 26561: AXG89_37500
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Entry
AXG89_37500 CDS
T05481
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bum
Burkholderia sp. PAMC 26561
Pathway
bum00300
Lysine biosynthesis
bum00470
D-Amino acid metabolism
bum01100
Metabolic pathways
bum01110
Biosynthesis of secondary metabolites
bum01120
Microbial metabolism in diverse environments
bum01230
Biosynthesis of amino acids
Module
bum_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bum00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AXG89_37500
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AXG89_37500
Enzymes [BR:
bum01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AXG89_37500
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AMH43410
UniProt:
A0A125SNM1
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All DBs
Position
3:726733..728151
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AA seq
472 aa
AA seq
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MTGHQPDANPCGFSVQYGKYIGIGANGNLWVDGCDVQTLAETHGAPLYIISENELRDRYR
AFRDGFLAHYPQVEILFANKSNNGLAIRHILNQEGAGGDCFGVNEMYIALLAGTDPQKLV
LNGSNKQEEELEMAISNGICVNIDAMDELDRIDAISKRLGKRAAIGIRLKLDLLPLAGRT
GVAMHGPGTLKEQSDSTKWGMTREQTVEIVKRAQQMPDIELKETHFHLSRMSNDPENFAI
MAREMITWSGFLRDETGWTPPCIDIGGGWTFGKWYGTGPRSQIDDNAAPTPEIYGRMCGA
AIREEAERLNLPLPKLRIEPGRAISGPSGVAVGRVGAIKQGATKKWVNLDLSTNHLSWAS
ALDWYYHAVAVKDTARPATEHVDLVGPLCNSDEVGADRTMPALARGDFVAFLDAGGYTES
GAARYNAQLLPATVLVAGDTAEVTTVREQWRDVAGRFKVPPRLLAASFAKNV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacaggacatcagcccgacgcaaatccctgcgggttttccgtgcagtacggcaagtac
atcggtattggcgccaacggcaatctctgggtcgacggctgcgacgtgcaaaccctcgcc
gagacgcacggcgcaccgctctacatcatttcggaaaacgaactgcgtgaccgatatcgc
gcgtttcgcgatggttttctcgcgcattatccgcaggtcgagattctcttcgccaacaag
tcgaacaacggactcgcgatccgccacatcctgaaccaggaaggcgcgggcggtgactgc
tttggcgtgaacgagatgtatatcgcgctgctagccggaaccgatccgcaaaagctcgta
ctcaacggctcgaacaagcaggaagaagaactcgagatggcgatctcgaatggcatctgc
gtgaatatcgatgcaatggatgaactggatcgcatcgatgcaatctcgaagcggcttggc
aagagggcggctatcggcatccggctcaagctcgacctgttgccgctcgcgggacgcacg
ggtgttgccatgcacggtcccggcacgctcaaggaacagagcgactcgaccaagtggggc
atgacgcgcgagcagaccgtcgagatcgtcaagcgggcgcagcagatgcctgatatcgag
ttgaaggaaacgcatttccacctgagccgcatgtcgaacgatcccgaaaatttcgcgatc
atggcgcgcgagatgatcacatggtccggcttcttgcgcgatgaaaccggctggacgccg
ccgtgcatcgacattggcggcggctggaccttcggcaagtggtacggcacggggccgcgc
tcgcagatcgacgacaacgccgcacccacgccggagatctacggccgtatgtgcggcgct
gcgatccgcgaagaagcggaacgcctgaacctgccgctgcccaaactgcgcattgaaccg
ggccgcgcaatttcggggccgtccggcgttgcagttggaagagtcggcgcgatcaagcag
ggcgccacgaaaaaatgggtgaacctggatctttcgacaaaccatctttcctgggcatcg
gcgctcgactggtactaccacgcggtcgccgtgaaggacaccgcgcgcccggcaacggag
cacgtcgatctggtcggtccgctttgcaactccgatgaagtcggcgccgatcgcaccatg
cccgcgctcgcacgcggtgatttcgtcgctttcctcgatgccggcggctacaccgaatcc
ggcgccgcgcgctataacgcgcaactgttgcccgcgacggtgctggtcgcgggcgatacc
gccgaggtcacgacggtgcgcgagcaatggcgcgacgttgccggacgcttcaaggtgccg
ccgcgtttgcttgcggcatcgtttgcgaaaaacgtctga
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